study_accession	experiment_accession	experiment_title	experiment_desc	organism_taxid 	organism_name	library_strategy	library_source	library_selection	sample_accession	sample_title	instrument	total_spots	total_size	run_accession	run_total_spots	run_total_bases
SRP253640	SRX7966548	Nasopharyngeal Swab Metatranscriptomics for identification of SARS-Cov-2. Total Human RNA	Nasopharyngeal Swab Metatranscriptomics for identification of SARS-Cov-2. Total Human RNA	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	METATRANSCRIPTOMIC	cDNA	SRS6352053		Ion Torrent S5	126839	6713322	SRR11365240	126839	8300927
SRP253640	SRX7966547	Metatranscriptome from the nasopharyngeal swab of COVID-19 symptomatic patient from Feira de Santana, Bahia, Brazil - depleted rRNA	Metatranscriptome from the nasopharyngeal swab of COVID-19 symptomatic patient from Feira de Santana, Bahia, Brazil - depleted rRNA	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	METATRANSCRIPTOMIC	cDNA	SRS6352053		Ion Torrent S5	353192	22200513	SRR11365239	353192	27740388
SRP253728	SRX7972388	swab_sispa_4	swab_sispa_4	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	METAGENOMIC	RANDOM PCR	SRS6357290		GridION	1909	1441407	SRR11393271	1909	1581263
SRP253728	SRX7972387	swab_sispa_3	swab_sispa_3	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	METAGENOMIC	RANDOM PCR	SRS6357288		GridION	1082	845935	SRR11393272	1082	891293
SRP253728	SRX7972386	swab_sispa_2	swab_sispa_2	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	METAGENOMIC	RANDOM PCR	SRS6357287		GridION	329412	249077397	SRR11393273	329412	288973843
SRP253728	SRX7972385	swab_sispa_1	swab_sispa_1	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	METAGENOMIC	RANDOM PCR	SRS6357289		GridION	20713	13468866	SRR11393274	20713	15704730
SRP253728	SRX7972384	swab_artic_4	swab_artic_4	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	VIRAL RNA	PCR	SRS6357286		GridION	475250	172983871	SRR11393275	475250	188942237
SRP253728	SRX7972383	swab_artic_3	swab_artic_3	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	VIRAL RNA	PCR	SRS6357284		GridION	408420	149024071	SRR11393276	408420	162756455
SRP253728	SRX7972382	swab_artic_2	swab_artic_2	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	VIRAL RNA	PCR	SRS6357283		GridION	742142	266472336	SRR11393277	742142	291023805
SRP253728	SRX7972381	swab_artic_1	swab_artic_1	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	VIRAL RNA	PCR	SRS6357285		GridION	743002	267000491	SRR11393278	743002	291596015
SRP252988	SRX7949318	RNA-seq of COVID-19 positive human from San Diego county	RNA-seq of COVID-19 positive human from San Diego county	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	PCR	SRS6325118		MinION	2645519	1696059020	SRR11347377	2645519	2114343649
SRP252988	SRX7918726	RNA-seq of COVID-19 positive human  from San Diego county	RNA-seq of COVID-19 positive human  from San Diego county	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	PCR	SRS6325118		Illumina MiSeq	517281	64753247	SRR11314339	517281	156068315
SRP252977	SRX7917956	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324342		GridION	622	436039	SRR11313470	622	387566
SRP252977	SRX7917955	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324343		GridION	50	109326	SRR11313270	50	31239
SRP252977	SRX7917954	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324341		GridION	76	129329	SRR11313271	76	53058
SRP252977	SRX7917953	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324340		GridION	21	100844	SRR11313272	21	22225
SRP252977	SRX7917952	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324339		GridION	1	78348	SRR11313273	1	410
SRP252977	SRX7917951	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324338		GridION	1978	1423974	SRR11313274	1978	1466036
SRP252977	SRX7917950	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324337		GridION	200	208445	SRR11313275	200	139403
SRP252977	SRX7917949	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324336		GridION	2741	1722468	SRR11313276	2741	1790911
SRP252977	SRX7917948	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324334		GridION	244	220445	SRR11313277	244	152322
SRP252977	SRX7917947	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324335		GridION	35	124781	SRR11313278	35	48522
SRP252977	SRX7917946	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324333		GridION	1	79449	SRR11313279	1	1258
SRP252977	SRX7917945	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324332		GridION	29840	19626474	SRR11313280	29840	21328421
SRP252977	SRX7917944	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324330		GridION	2769	1846539	SRR11313281	2769	1926994
SRP252977	SRX7917943	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324331		GridION	82	166664	SRR11313282	82	94454
SRP252977	SRX7917942	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324329		GridION	19	106563	SRR11313283	19	28449
SRP252977	SRX7917941	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324328		GridION	1	79719	SRR11313284	1	1458
SRP252977	SRX7917940	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324327		GridION	20814	13606413	SRR11313285	20814	14759827
SRP252977	SRX7917939	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324326		GridION	1628	1112254	SRR11313286	1628	1124662
SRP252977	SRX7917938	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324324		GridION	22374	14198094	SRR11313287	22374	15397651
SRP252977	SRX7917937	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324325		GridION	5202	2600463	SRR11313288	5202	2746094
SRP252977	SRX7917936	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324323		GridION	1821	1191913	SRR11313289	1821	1210380
SRP252977	SRX7917935	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324322		GridION	207	180549	SRR11313290	207	109785
SRP252977	SRX7917934	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324321		GridION	6185	5059669	SRR11313291	6185	5446065
SRP252977	SRX7917933	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324320		GridION	3180	2596911	SRR11313292	3180	2752369
SRP252977	SRX7917932	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324319		GridION	1608	1355493	SRR11313293	1608	1394642
SRP252977	SRX7917931	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324318		GridION	800	726413	SRR11313294	800	706757
SRP252977	SRX7917930	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324317		GridION	252	276476	SRR11313295	252	214139
SRP252977	SRX7917929	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324316		GridION	7900	5331666	SRR11313296	7900	5722143
SRP252977	SRX7917928	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324315		GridION	4193	2845328	SRR11313297	4193	3012829
SRP252977	SRX7917927	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324314		GridION	2138	1488844	SRR11313298	2138	1535424
SRP252977	SRX7917926	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324313		GridION	1055	774800	SRR11313299	1055	757401
SRP252977	SRX7917925	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324312		GridION	77	157432	SRR11313300	77	84079
SRP252977	SRX7917924	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324311		GridION	328	296905	SRR11313301	328	236202
SRP252977	SRX7917923	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324310		GridION	14019	9783020	SRR11313302	14019	10587822
SRP252977	SRX7917922	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324309		GridION	7216	5048514	SRR11313303	7216	5421095
SRP252977	SRX7917921	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324308		GridION	3680	2607635	SRR11313304	3680	2758116
SRP252977	SRX7917920	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324307		GridION	1864	1356960	SRR11313305	1864	1393213
SRP252977	SRX7917919	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324305		GridION	655	529408	SRR11313306	655	489686
SRP252977	SRX7917918	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324306		GridION	20623	13093359	SRR11313307	20623	14194243
SRP252977	SRX7917917	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324304		GridION	10313	6569725	SRR11313308	10313	7078703
SRP252977	SRX7917916	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324303		GridION	5133	3295818	SRR11313309	5133	3508951
SRP252977	SRX7917915	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324302		GridION	2651	1740506	SRR11313310	2651	1812236
SRP252977	SRX7917914	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324301		GridION	6	84967	SRR11313311	6	4837
SRP252977	SRX7917913	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324300		GridION	859	623254	SRR11313312	859	592506
SRP252977	SRX7917912	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324298		GridION	16203	12369103	SRR11313313	16203	13451056
SRP252977	SRX7917911	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324299		GridION	7679	5869426	SRR11313314	7679	6337037
SRP252977	SRX7917910	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324297		GridION	3780	2904262	SRR11313315	3780	3091121
SRP252977	SRX7917909	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324296		GridION	1950	1540106	SRR11313316	1950	1597782
SRP252977	SRX7917908	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324295		GridION	638	553518	SRR11313317	638	517640
SRP252977	SRX7917907	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324294		GridION	1556	1129064	SRR11313318	1556	1141773
SRP252977	SRX7917906	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324293		GridION	811	624632	SRR11313319	811	592655
SRP252977	SRX7917905	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324292		GridION	423	365821	SRR11313320	423	310929
SRP252977	SRX7917904	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324291		GridION	227	234187	SRR11313321	227	167619
SRP252977	SRX7917903	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324290		GridION	58	149191	SRR11313322	58	75186
SRP252977	SRX7917902	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324289		GridION	93	142601	SRR11313323	93	67631
SRP252977	SRX7917901	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324288		GridION	1448	675010	SRR11313324	1448	645674
SRP252977	SRX7917900	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324287		GridION	779	396992	SRR11313325	779	343667
SRP252977	SRX7917899	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324285		GridION	411	252969	SRR11313326	411	187577
SRP252977	SRX7917898	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324286		GridION	217	173490	SRR11313327	217	100887
SRP252977	SRX7917897	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324284		GridION	69	115050	SRR11313328	69	37367
SRP252977	SRX7917896	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324283		GridION	80	110740	SRR11313329	80	32653
SRP252977	SRX7917895	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324282		GridION	45	96778	SRR11313330	45	17570
SRP252977	SRX7917894	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324281		GridION	27	90432	SRR11313331	27	10735
SRP252977	SRX7917893	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324280		GridION	17	87448	SRR11313332	17	7519
SRP252977	SRX7917892	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324278		GridION	2	82102	SRR11313333	2	1720
SRP252977	SRX7917891	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324279		GridION	5	85551	SRR11313334	5	5476
SRP252977	SRX7917890	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324277		GridION	7	82641	SRR11313335	7	2326
SRP252977	SRX7917889	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324276		GridION	681	576464	SRR11313336	681	542217
SRP252977	SRX7917888	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324275		GridION	340	329312	SRR11313337	340	271903
SRP252977	SRX7917887	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324274		GridION	155	191607	SRR11313338	155	121442
SRP252977	SRX7917886	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324273		GridION	90	145420	SRR11313339	90	70952
SRP252977	SRX7917885	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324271		GridION	35	105888	SRR11313340	35	27753
SRP252977	SRX7917884	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324272		GridION	813	615750	SRR11313341	813	582441
SRP252977	SRX7917883	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324270		GridION	388	331657	SRR11313342	388	273133
SRP252977	SRX7917882	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324269		GridION	197	206449	SRR11313343	197	136999
SRP252977	SRX7917881	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324268		GridION	104	146677	SRR11313344	104	71913
SRP252977	SRX7917880	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324267		GridION	204	233677	SRR11313345	204	167337
SRP252977	SRX7917879	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324266		GridION	40	105730	SRR11313346	40	27360
SRP252977	SRX7917878	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324265		GridION	929	701533	SRR11313347	929	675579
SRP252977	SRX7917877	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324264		GridION	500	413590	SRR11313348	500	362137
SRP252977	SRX7917876	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324263		GridION	241	239877	SRR11313349	241	173335
SRP252977	SRX7917875	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324262		GridION	115	156469	SRR11313350	115	82423
SRP252977	SRX7917874	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324261		GridION	40	107269	SRR11313351	40	28987
SRP252977	SRX7917873	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324260		GridION	285	165230	SRR11313352	285	91576
SRP252977	SRX7917872	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324259		GridION	122	117408	SRR11313353	122	39773
SRP252977	SRX7917871	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324258		GridION	71	102679	SRR11313354	71	23812
SRP252977	SRX7917870	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324257		GridION	36	92110	SRR11313355	36	12410
SRP252977	SRX7917869	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324256		GridION	20	94454	SRR11313356	20	15116
SRP252977	SRX7917868	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324255		GridION	14	84666	SRR11313357	14	4458
SRP252977	SRX7917867	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324254		GridION	27	101380	SRR11313358	27	22672
SRP252977	SRX7917866	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324253		GridION	11	91224	SRR11313359	11	11655
SRP252977	SRX7917865	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324252		GridION	7	88158	SRR11313360	7	8316
SRP252977	SRX7917864	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324251		GridION	3	84137	SRR11313361	3	3909
SRP252977	SRX7917863	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324250		GridION	42	106328	SRR11313362	42	27996
SRP252977	SRX7917862	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324249		GridION	23	93795	SRR11313363	23	14361
SRP252977	SRX7917861	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324248		GridION	10	86308	SRR11313364	10	6219
SRP252977	SRX7917860	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324247		GridION	5	82996	SRR11313365	5	2661
SRP252977	SRX7917859	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324246		GridION	2	81466	SRR11313366	2	1012
SRP252977	SRX7917858	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324245		GridION	32	115107	SRR11313367	32	37685
SRP252977	SRX7917857	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324244		GridION	1480	1038215	SRR11313368	1480	1043911
SRP252977	SRX7917856	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324243		GridION	717	544310	SRR11313369	717	505483
SRP252977	SRX7917855	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324242		GridION	365	317891	SRR11313370	365	258599
SRP252977	SRX7917854	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324241		GridION	180	200213	SRR11313371	180	130246
SRP252977	SRX7917853	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324240		GridION	67	126969	SRR11313372	67	50349
SRP252977	SRX7917852	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324239		GridION	154	113605	SRR11313373	154	35615
SRP252977	SRX7917851	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324238		GridION	90	98317	SRR11313374	90	19092
SRP252977	SRX7917850	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324237		GridION	46	89544	SRR11313375	46	9614
SRP252977	SRX7917849	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324236		GridION	25	85392	SRR11313376	25	5162
SRP252977	SRX7917848	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324235		GridION	8	82072	SRR11313377	8	1633
SRP252977	SRX7917847	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324234		GridION	1	78818	SRR11313378	1	786
SRP252977	SRX7917846	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324233		GridION	221	191254	SRR11313379	221	120159
SRP252977	SRX7917845	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324232		GridION	120	138757	SRR11313380	120	63100
SRP252977	SRX7917844	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324231		GridION	65	113617	SRR11313381	65	35822
SRP252977	SRX7917843	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324230		GridION	35	98458	SRR11313382	35	19363
SRP252977	SRX7917842	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324229		GridION	14	86919	SRR11313383	14	6858
SRP252977	SRX7917841	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324228		GridION	116	140844	SRR11313384	116	65506
SRP252977	SRX7917840	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324227		GridION	52	107180	SRR11313385	52	28868
SRP252977	SRX7917839	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324226		GridION	24	91831	SRR11313386	24	12242
SRP252977	SRX7917838	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324225		GridION	11	84904	SRR11313387	11	4784
SRP252977	SRX7917837	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324224		GridION	4	82004	SRR11313388	4	1634
SRP252977	SRX7917836	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324223		GridION	630	531684	SRR11313389	630	493743
SRP252977	SRX7917835	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324222		GridION	371	285591	SRR11313390	371	222897
SRP252977	SRX7917834	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324221		GridION	183	181409	SRR11313391	183	109657
SRP252977	SRX7917833	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324220		GridION	86	127136	SRR11313392	86	50584
SRP252977	SRX7917832	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324219		GridION	40	104538	SRR11313393	40	25996
SRP252977	SRX7917831	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324218		GridION	11	87397	SRR11313394	11	7419
SRP252977	SRX7917830	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324217		GridION	145	175312	SRR11313395	145	103183
SRP252977	SRX7917829	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324216		GridION	69	125246	SRR11313396	69	48542
SRP252977	SRX7917828	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324215		GridION	35	103078	SRR11313397	35	24448
SRP252977	SRX7917827	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324214		GridION	15	89904	SRR11313398	15	10165
SRP252977	SRX7917826	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324213		GridION	3	82307	SRR11313399	3	1976
SRP252977	SRX7917825	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324212		GridION	77	133754	SRR11313400	77	58134
SRP252977	SRX7917824	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324211		GridION	4	83511	SRR11313401	4	3244
SRP252977	SRX7917823	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324210		GridION	2	81481	SRR11313402	2	1058
SRP252977	SRX7917822	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324209		GridION	1	78061	SRR11313403	1	268
SRP252977	SRX7917821	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324208		GridION	10	91577	SRR11313404	10	11990
SRP252977	SRX7917820	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324207		GridION	6	87625	SRR11313405	6	7790
SRP252977	SRX7917819	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324206		GridION	49	142703	SRR11313406	49	67617
SRP252977	SRX7917818	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324205		GridION	3	84477	SRR11313408	3	4269
SRP252977	SRX7917817	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324204		GridION	71	138531	SRR11313409	71	62994
SRP252977	SRX7917816	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324203		GridION	2	83043	SRR11313410	2	2697
SRP252977	SRX7917815	NTS: negative	NTS: negative	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	OTHER	PCR	SRS6324202		GridION	4081	3061554	SRR11313411	4081	3245589
SRP252977	SRX7917814	NTS: negative	NTS: negative	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	OTHER	PCR	SRS6324201		GridION	239	249318	SRR11313412	239	184045
SRP252977	SRX7917813	NTS: negative	NTS: negative	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	OTHER	PCR	SRS6324200		GridION	6	88806	SRR11313413	6	9045
SRP252977	SRX7917812	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324199		GridION	36	115430	SRR11313414	36	37985
SRP252977	SRX7917811	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324198		GridION	5	83449	SRR11313415	5	3186
SRP252977	SRX7917810	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324197		GridION	198	243424	SRR11313416	198	177358
SRP252977	SRX7917809	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324196		GridION	8494	5668892	SRR11313417	8494	6100361
SRP252977	SRX7917808	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324195		GridION	15	93555	SRR11313418	15	14164
SRP252977	SRX7917807	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324194		GridION	26900	17911676	SRR11313419	26900	19414496
SRP252977	SRX7917806	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324193		GridION	1561	1083490	SRR11313420	1561	1094057
SRP252977	SRX7917805	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324192		GridION	21460	14350079	SRR11313421	21460	15542645
SRP252977	SRX7917804	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324191		GridION	1398	975000	SRR11313422	1398	975690
SRP252977	SRX7917803	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324190		GridION	1051	600392	SRR11313423	1051	563753
SRP252977	SRX7917802	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324189		GridION	65	109997	SRR11313424	65	31779
SRP252977	SRX7917801	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324188		GridION	12133	8050701	SRR11313425	12133	8680929
SRP252977	SRX7917800	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324187		GridION	705	527386	SRR11313426	705	487229
SRP252977	SRX7917799	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324186		GridION	516	402913	SRR11313427	516	350073
SRP252977	SRX7917798	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324185		GridION	686	522734	SRR11313428	686	482047
SRP252977	SRX7917797	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324184		GridION	39	103260	SRR11313429	39	24543
SRP252977	SRX7917796	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324183		GridION	448	407255	SRR11313430	448	355730
SRP252977	SRX7917795	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324182		GridION	20	93432	SRR11313431	20	14016
SRP252977	SRX7917794	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324181		GridION	56	143637	SRR11313432	56	68876
SRP252977	SRX7917793	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324180		GridION	1	79169	SRR11313433	1	1049
SRP252977	SRX7917792	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324179		GridION	4557	3070910	SRR11313434	4557	3255594
SRP252977	SRX7917791	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324178		GridION	291	270356	SRR11313435	291	206514
SRP252977	SRX7917790	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324177		GridION	9086	6348660	SRR11313436	9086	6831885
SRP252977	SRX7917789	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324176		GridION	651	516203	SRR11313437	651	475863
SRP252977	SRX7917788	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324175		GridION	3173	2250824	SRR11313438	3173	2363890
SRP252977	SRX7917787	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324174		GridION	50	132950	SRR11313439	50	57389
SRP252977	SRX7917786	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324173		GridION	244	245157	SRR11313440	244	179652
SRP252977	SRX7917785	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324172		GridION	4040	2630979	SRR11313441	4040	2775572
SRP252977	SRX7917784	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324171		GridION	279	251339	SRR11313442	279	186121
SRP252977	SRX7917783	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324170		GridION	806	618633	SRR11313443	806	585258
SRP252977	SRX7917782	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324169		GridION	34	102172	SRR11313444	34	23452
SRP252977	SRX7917781	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324168		GridION	7467	4314460	SRR11313445	7467	4604206
SRP252977	SRX7917780	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324167		GridION	494	345279	SRR11313446	494	288123
SRP252977	SRX7917779	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324166		GridION	42	124583	SRR11313447	42	47970
SRP252977	SRX7917778	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324165		GridION	769	660669	SRR11313448	769	632027
SRP252977	SRX7917777	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324164		GridION	43	112707	SRR11313449	43	35080
SRP252977	SRX7917776	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324163		GridION	2	83099	SRR11313450	2	2814
SRP252977	SRX7917775	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324162		GridION	63	125004	SRR11313451	63	48247
SRP252977	SRX7917774	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324161		GridION	5	85031	SRR11313452	5	4892
SRP252977	SRX7917773	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324160		GridION	77	163975	SRR11313453	77	90948
SRP252977	SRX7917772	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324159		GridION	5	86005	SRR11313454	5	5935
SRP252977	SRX7917771	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324158		GridION	1379	1088178	SRR11313455	1379	1097388
SRP252977	SRX7917770	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324157		GridION	79	133928	SRR11313456	79	58128
SRP252977	SRX7917769	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324156		GridION	54	115360	SRR11313457	54	37955
SRP252977	SRX7917768	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324155		GridION	2	81601	SRR11313458	2	1249
SRP252977	SRX7917767	NTS: negative	NTS: negative	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	OTHER	PCR	SRS6324154		GridION	2555	1948582	SRR11313459	2555	2037934
SRP252977	SRX7917766	NTS: negative	NTS: negative	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	OTHER	PCR	SRS6324153		GridION	230	241995	SRR11313460	230	176243
SRP252977	SRX7917765	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324152		GridION	670	528656	SRR11313461	670	489215
SRP252977	SRX7917764	NTS: negative	NTS: negative	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	OTHER	PCR	SRS6324151		GridION	320	316478	SRR11313462	320	258632
SRP252977	SRX7917763	NTS: negative	NTS: negative	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	OTHER	PCR	SRS6324150		GridION	34	105292	SRR11313463	34	27128
SRP252977	SRX7917762	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324149		GridION	21801	14443987	SRR11313464	21801	15676985
SRP252977	SRX7917761	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324148		GridION	1921	1321263	SRR11313465	1921	1354324
SRP252977	SRX7917760	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324147		GridION	136	224405	SRR11313466	136	158103
SRP252977	SRX7917759	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324146		GridION	6	86760	SRR11313467	6	6764
SRP252977	SRX7917758	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324145		GridION	14920	9734681	SRR11313468	14920	10537727
SRP252977	SRX7917757	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324144		GridION	1181	818397	SRR11313469	1181	804579
SRP252977	SRX7917756	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324143		GridION	104	176103	SRR11313269	104	103835
SRP252977	SRX7917755	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324142		GridION	6	85784	SRR11313471	6	5738
SRP252977	SRX7917754	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324141		GridION	3	82306	SRR11313472	3	2018
SRP252977	SRX7917753	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324140		GridION	220	269638	SRR11313473	220	206799
SRP252977	SRX7917752	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324139		GridION	14	90915	SRR11313474	14	11300
SRP252977	SRX7917751	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324138		GridION	3	84732	SRR11313407	3	4627
SRP252977	SRX7917750	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324137		GridION	1	79185	SRR11313475	1	1046
SRP252977	SRX7917749	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324136		GridION	7	89469	SRR11313476	7	9675
SRP252977	SRX7917748	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324135		GridION	6	88930	SRR11313477	6	9090
SRP252977	SRX7917747	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324134		GridION	4	86903	SRR11313478	4	6902
SRP252977	SRX7917746	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324133		GridION	54	134704	SRR11313479	54	59392
SRP252977	SRX7917745	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324132		GridION	2	83156	SRR11313480	2	2852
SRP252977	SRX7917744	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324131		GridION	5	87889	SRR11313481	5	7925
SRP252977	SRX7917743	NTS: plasmid	NTS: plasmid	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	SYNTHETIC	PCR	SRS6324130		GridION	2	83768	SRR11313482	2	3508
SRP252977	SRX7917742	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324129		GridION	45	140815	SRR11313483	45	65680
SRP252977	SRX7917741	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324128		GridION	2	82657	SRR11313484	2	2317
SRP252977	SRX7917740	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324127		GridION	518	445112	SRR11313485	518	397286
SRP252977	SRX7917739	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324126		GridION	28	100843	SRR11313486	28	22093
SRP252977	SRX7917738	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324125		GridION	55	159866	SRR11313487	55	86380
SRP252977	SRX7917737	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324124		GridION	2	83296	SRR11313488	2	3014
SRP252977	SRX7917736	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324123		GridION	299	297951	SRR11313489	299	236590
SRP252977	SRX7917735	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324122		GridION	4	83531	SRR11313490	4	3232
SRP252977	SRX7917734	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324121		GridION	18	93470	SRR11313491	18	14009
SRP252977	SRX7917733	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324120		GridION	3378	2329638	SRR11313492	3378	2450321
SRP252977	SRX7917732	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324119		GridION	171	193633	SRR11313493	171	123672
SRP252977	SRX7917731	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324118		GridION	39036	25789798	SRR11313494	39036	28003397
SRP252977	SRX7917730	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324117		GridION	2113	1444495	SRR11313495	2113	1493210
SRP252977	SRX7917729	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324116		GridION	146	209870	SRR11313496	146	140533
SRP252977	SRX7917728	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324115		GridION	8	88020	SRR11313497	8	8101
SRP252977	SRX7917727	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324114		GridION	52	156213	SRR11313498	52	82405
SRP252977	SRX7917726	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324113		GridION	3	84499	SRR11313499	3	4327
SRP252977	SRX7917725	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324112		GridION	52	114960	SRR11313500	52	37257
SRP252977	SRX7917724	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324111		GridION	16	93439	SRR11313501	16	14147
SRP252977	SRX7917723	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324110		GridION	1	78387	SRR11313502	1	468
SRP252977	SRX7917722	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324109		GridION	62	130416	SRR11313503	62	54039
SRP252977	SRX7917721	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324108		GridION	4	83609	SRR11313504	4	3303
SRP252977	SRX7917720	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324107		GridION	314	278926	SRR11313505	314	215664
SRP252977	SRX7917719	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324106		GridION	23	97309	SRR11313506	23	18114
SRP252977	SRX7917718	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324105		GridION	1893	1348593	SRR11313507	1893	1378954
SRP252977	SRX7917717	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324104		GridION	87	141311	SRR11313508	87	66231
SRP252977	SRX7917716	NTS: clinical sample	NTS: clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	AMPLICON	VIRAL RNA	PCR	SRS6324103		GridION	41	116837	SRR11313509	41	39202
SRP250446	SRX7906017	GridION RNA sequencing of coronavirus:SARS-CoV-2/Australia/VIC01/2020/virion	GridION RNA sequencing of coronavirus:SARS-CoV-2/Australia/VIC01/2020/virion	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	Oligo-dT	SRS6313628		GridION	430923	398083711	SRR11300652	430923	416793360
SRP250446	SRX7884843	GridION RNA sequencing of coronavirus:SARS-CoV-2/Australia/VIC01/2020	GridION RNA sequencing of coronavirus:SARS-CoV-2/Australia/VIC01/2020	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	Oligo-dT	SRS6201528		GridION	779208	829679932	SRR11350376	779208	910279521
SRP251618	SRX7884411	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6294250		NextSeq 500	3801124	36188829	SRR11278164	3801124	284858490
SRP251618	SRX7884410	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6294249		NextSeq 500	122658	1549024	SRR11278165	122658	9173640
SRP251618	SRX7884409	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6294248		NextSeq 500	8213820	78215367	SRR11278166	8213820	615986088
SRP251618	SRX7884408	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6294247		NextSeq 500	10124079	101917956	SRR11278167	10124079	759300927
SRP251618	SRX7884407	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6294246		NextSeq 500	44159	616037	SRR11278168	44159	2913504
SRP251618	SRX7884335	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6294173		NextSeq 500	24424	409227	SRR11278090	24424	1830456
SRP251618	SRX7884334	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6294172		NextSeq 500	597251	4630806	SRR11278091	597251	44717558
SRP251618	SRX7884333	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6294171		NextSeq 500	101360	977847	SRR11278092	101360	7592719
SRP252022	SRX7874444	Detect SARS-CoV-2 genomic mutations from  fecal swab samples	Detect SARS-CoV-2 genomic mutations from  fecal swab samples	2697049	Severe acute respiratory syndrome coronavirus 2	WGA	METAGENOMIC	RANDOM PCR	SRS6282736		BGISEQ-500	107	85399	SRR11267811	107	9951
SRP250446	SRX7874203	GridION RNA sequencing of coronavirus:SARS-CoV-2/Australia/VIC01/2020	GridION RNA sequencing of coronavirus:SARS-CoV-2/Australia/VIC01/2020	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	Oligo-dT	SRS6201528		GridION	779208	859122004	SRR11267570	779208	910279521
SRP251618	SRX7857605	RNA-Seq of Severe  acute respiratory syndrome coronavirus 2	RNA-Seq of Severe  acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6266707		Illumina MiSeq	10454	440815	SRR11247075	10454	888775
SRP251618	SRX7857604	RNA-Seq of Severe  acute respiratory syndrome coronavirus 2	RNA-Seq of Severe  acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6266706		Illumina MiSeq	61329	2640519	SRR11247076	61329	11080510
SRP251618	SRX7857603	RNA-Seq of Severe  acute respiratory syndrome coronavirus 2	RNA-Seq of Severe  acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6266705		Illumina MiSeq	643627	21122755	SRR11247077	643627	118148011
SRP251618	SRX7857602	RNA-Seq of Severe  acute respiratory syndrome coronavirus 2	RNA-Seq of Severe  acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6266704		Illumina MiSeq	1087374	37244510	SRR11247078	1087374	199651225
SRP251618	SRX7852918	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6262461		Illumina MiSeq	131952	4502386	SRR11241254	131952	22249638
SRP251618	SRX7852917	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	RNA-Seq of Severe acute respiratory syndrome coronavirus 2	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	unspecified	SRS6262460		Illumina MiSeq	123353	4854747	SRR11241255	123353	22252301
SRP250661	SRX7798736	WGS of Coronavirus:clinical sample	WGS of Coronavirus:clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	GENOMIC	RANDOM	SRS6213613		MinION	359570	142622435	SRR11178050	359570	156951923
SRP250661	SRX7798735	WGS of Coronavirus:clinical sample	WGS of Coronavirus:clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	GENOMIC	RANDOM	SRS6213612		MinION	775912	385017266	SRR11178051	775912	421622706
SRP250661	SRX7798734	WGS of Coronavirus:clinical sample	WGS of Coronavirus:clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	GENOMIC	RANDOM	SRS6213611		MinION	2142901	922741349	SRR11178052	2142901	1000052155
SRP250661	SRX7798733	WGS of Coronavirus:clinical sample	WGS of Coronavirus:clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	GENOMIC	RANDOM	SRS6213610		MinION	860687	331100955	SRR11178053	860687	363625817
SRP250661	SRX7798732	WGS of Coronavirus:clinical sample	WGS of Coronavirus:clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	GENOMIC	RANDOM	SRS6213609		MinION	586546	287766211	SRR11178054	586546	316335060
SRP250661	SRX7798731	WGS of Coronavirus:clinical sample	WGS of Coronavirus:clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	GENOMIC	RANDOM	SRS6213608		MinION	1052685	554666910	SRR11178055	1052685	600378949
SRP250661	SRX7798730	WGS of Coronavirus:clinical sample	WGS of Coronavirus:clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	GENOMIC	RANDOM	SRS6213607		MinION	808223	404802894	SRR11178056	808223	443789956
SRP250661	SRX7798729	WGS of Coronavirus:clinical sample	WGS of Coronavirus:clinical sample	2697049	Severe acute respiratory syndrome coronavirus 2	WGS	GENOMIC	RANDOM	SRS6213606		MinION	1089986	475737679	SRR11178057	1089986	518864113
SRP250653	SRX7798477	RNA-Seq of Severe acute respiratory syndrome coronavirus 2: adult male throat swab	RNA-Seq of Severe acute respiratory syndrome coronavirus 2: adult male throat swab	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	GENOMIC	RT-PCR	SRS6213494		Illumina MiSeq	5246584	1293360832	SRR11177792	5246584	2817120987
SRP250294	SRX7777166	SARS-CoV-2 veroSTAT-1KO_illumina	SARS-CoV-2 veroSTAT-1KO_illumina	2697049	Wuhan seafood market pneumonia virus	WGS	METAGENOMIC	RANDOM PCR	SRS6189924		Illumina MiSeq	503344	108481864	SRR11140744	503344	226957916
SRP250294	SRX7777165	SARS-CoV-2 veroSTAT-1KO_ONT	SARS-CoV-2 veroSTAT-1KO_ONT	2697049	Wuhan seafood market pneumonia virus	WGS	METAGENOMIC	RANDOM PCR	SRS6189920		GridION	396363	240280298	SRR11140745	396363	260956833
SRP250294	SRX7777164	SARS-CoV-2 veroE6_illumina	SARS-CoV-2 veroE6_illumina	2697049	Wuhan seafood market pneumonia virus	WGS	METAGENOMIC	RANDOM PCR	SRS6189919		Illumina MiSeq	358971	77997568	SRR11140746	358971	159508570
SRP250294	SRX7777163	SARS-CoV-2 veroE6_ONT	SARS-CoV-2 veroE6_ONT	2697049	Wuhan seafood market pneumonia virus	WGS	METAGENOMIC	RANDOM PCR	SRS6189917		GridION	566845	332198738	SRR11140747	566845	359000999
SRP250294	SRX7777162	SARS-CoV-2 vero76_illumina	SARS-CoV-2 vero76_illumina	2697049	Wuhan seafood market pneumonia virus	WGS	METAGENOMIC	RANDOM PCR	SRS6189918		Illumina MiSeq	421395	92488120	SRR11140748	421395	190194752
SRP250294	SRX7777161	SARS-CoV-2 vero76_ONT	SARS-CoV-2 vero76_ONT	2697049	Wuhan seafood market pneumonia virus	WGS	METAGENOMIC	RANDOM PCR	SRS6189916		GridION	482954	280564726	SRR11140749	482954	304113442
SRP250294	SRX7777160	SARS-CoV-2 swab_illumina	SARS-CoV-2 swab_illumina	2697049	Wuhan seafood market pneumonia virus	WGS	METAGENOMIC	RANDOM PCR	SRS6189914		Illumina MiSeq	17657	3824341	SRR11140750	17657	7650166
SRP250294	SRX7777159	SARS-CoV-2 swab_ONT	SARS-CoV-2 swab_ONT	2697049	Wuhan seafood market pneumonia virus	WGS	METAGENOMIC	RANDOM PCR	SRS6189915		GridION	37999	21841904	SRR11140751	37999	23696161
SRP248092	SRX7705838	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	METATRANSCRIPTOMIC	RT-PCR	SRS6129666		Illumina HiSeq 2500	76740	2158046	SRR11059940	76740	8325534
SRP248092	SRX7705837	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	METATRANSCRIPTOMIC	RT-PCR	SRS6129665		Illumina HiSeq 2500	13048	893803	SRR11059941	13048	1477468
SRP248092	SRX7705836	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	METATRANSCRIPTOMIC	RT-PCR	SRS6129664		Illumina HiSeq 2500	1974638	49376270	SRR11059942	1974638	212641182
SRP248092	SRX7705835	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	METATRANSCRIPTOMIC	RT-PCR	SRS6129663		Illumina HiSeq 2500	182228	5973682	SRR11059943	182228	19977094
SRP248092	SRX7705834	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	METATRANSCRIPTOMIC	RT-PCR	SRS6129662		Illumina HiSeq 2500	1012571	42379609	SRR11059944	1012571	134313125
SRP248092	SRX7705833	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	METATRANSCRIPTOMIC	RT-PCR	SRS6129661		Illumina HiSeq 2500	186576	9286674	SRR11059945	186576	24513827
SRP248092	SRX7705832	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	METATRANSCRIPTOMIC	RT-PCR	SRS6129660		Illumina HiSeq 2500	5247615	219591039	SRR11059946	5247615	726432925
SRP248092	SRX7705831	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	METATRANSCRIPTOMIC	RT-PCR	SRS6129659		Illumina HiSeq 2500	66043074	2356905142	SRR11059947	66043074	8728641275
SRP245409	SRX7636886	Complete genome of a novel coronavirus associated with severe human respiratory disease in Wuhan, China	Complete genome of a novel coronavirus associated with severe human respiratory disease in Wuhan, China	433733	human lung metagenome	RNA-Seq	METATRANSCRIPTOMIC	RANDOM	SRS6067521		Illumina MiniSeq	28282964	2743427127	SRR10971381	28282964	8031043214
SRP242169	SRX7615629	Whole genome sequencing of BetaCoronavirus	Whole genome sequencing of BetaCoronavirus	2697049	Wuhan seafood market pneumonia virus	RNA-Seq	GENOMIC	RANDOM	SRS6014638		MinION	425717	132697821	SRR10948550	425717	146271136
SRP242169	SRX7615553	Sequencing of Betacoronavirus	Sequencing of Betacoronavirus	2697049	Wuhan seafood market pneumonia virus	RNA-Seq	GENOMIC	RANDOM	SRS6048919		MinION	505484	262201551	SRR10948474	505484	284575255
SRP242226	SRX7571571	Total RNA sequencing of BALF (human reads removed)	Total RNA sequencing of BALF (human reads removed)	9606	Homo sapiens	RNA-Seq	METATRANSCRIPTOMIC	RANDOM	SRS6007144		Illumina MiSeq	476632	72426963	SRR10903401	476632	143565674
SRP242226	SRX7571570	Total RNA sequencing of BALF (human reads removed)	Total RNA sequencing of BALF (human reads removed)	9606	Homo sapiens	RNA-Seq	METATRANSCRIPTOMIC	RANDOM	SRS6007143		Illumina MiSeq	676694	104687344	SRR10903402	676694	203832203
SRP242169	SRX7570458	Human:NPS	Human:NPS	2697049	Wuhan seafood market pneumonia virus	RNA-Seq	METAGENOMIC	RANDOM	SRS6014638		MinION	261890	82541246	SRR10902284	261890	90569410
SRP250446	SRX7906261	GridION RNA sequencing of coronavirus:SARS-CoV-2/Australia/VIC01/2020/virion	GridION RNA sequencing of coronavirus:SARS-CoV-2/Australia/VIC01/2020/virion	2697049	Severe acute respiratory syndrome coronavirus 2	RNA-Seq	VIRAL RNA	Oligo-dT	SRS6313628		GridION	0	0	SRR11300931		
