/*
 * -------------------------------------------------
 *  Nextflow config file for running full-size tests
 * -------------------------------------------------
 * Defines bundled input files and everything required
 * to run a full size pipeline test. Use as follows:
 *   nextflow run nf-core/hlatyping -profile test_full,<docker/singularity>
 */

params {
  config_profile_name = 'Full test profile'
  config_profile_description = 'Full test dataset to check pipeline function'

  // Input data for full size test
  single_end = false
  input_paths = [
     ['Testdata', ['ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR795/SRR795091/SRR795091_1.fastq.gz',
        'ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR795/SRR795091/SRR795091_2.fastq.gz']]
  ]
  solver = 'glpk'
  seqtype = 'dna'
  bam = false
  outdir = "results"
}
