{
    "name": "nf-core/mag",
    "homePage": "https://github.com/nf-core/mag",
    "repos": {
        "https://github.com/nf-core/modules.git": {
            "modules": {
                "nf-core": {
                    "adapterremoval": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "aria2": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/aria2/aria2.diff"
                    },
                    "bbmap/bbnorm": {
                        "branch": "master",
                        "git_sha": "603ecbd9f45300c9788f197d2a15a005685b4220",
                        "installed_by": ["modules"]
                    },
                    "bcftools/consensus": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "bcftools/index": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "bcftools/view": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "cat/fastq": {
                        "branch": "master",
                        "git_sha": "5c460c5a4736974abde2843294f35307ee2b0e5e",
                        "installed_by": ["modules"]
                    },
                    "checkm/lineagewf": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "checkm/qa": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "concoct/concoct": {
                        "branch": "master",
                        "git_sha": "c684a6edba2c8516a0d2cfeafb12489b99d2fffb",
                        "installed_by": ["fasta_binning_concoct"]
                    },
                    "concoct/concoctcoveragetable": {
                        "branch": "master",
                        "git_sha": "36aa9d3ce6561d9bd5c240bcf82fe109af543c0d",
                        "installed_by": ["fasta_binning_concoct"]
                    },
                    "concoct/cutupfasta": {
                        "branch": "master",
                        "git_sha": "36aa9d3ce6561d9bd5c240bcf82fe109af543c0d",
                        "installed_by": ["fasta_binning_concoct"]
                    },
                    "concoct/extractfastabins": {
                        "branch": "master",
                        "git_sha": "36aa9d3ce6561d9bd5c240bcf82fe109af543c0d",
                        "installed_by": ["fasta_binning_concoct"]
                    },
                    "concoct/mergecutupclustering": {
                        "branch": "master",
                        "git_sha": "36aa9d3ce6561d9bd5c240bcf82fe109af543c0d",
                        "installed_by": ["fasta_binning_concoct"]
                    },
                    "custom/dumpsoftwareversions": {
                        "branch": "master",
                        "git_sha": "05c280924b6c768d484c7c443dad5e605c4ff4b4",
                        "installed_by": ["modules"]
                    },
                    "dastool/dastool": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "dastool/fastatocontig2bin": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "fastp": {
                        "branch": "master",
                        "git_sha": "d497a4868ace3302016ea8ed4b395072d5e833cd",
                        "installed_by": ["modules"]
                    },
                    "fastqc": {
                        "branch": "master",
                        "git_sha": "9a4517e720bc812e95b56d23d15a1653b6db4f53",
                        "installed_by": ["modules"]
                    },
                    "freebayes": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "genomad/download": {
                        "branch": "master",
                        "git_sha": "ca813f3f73adedf3547a5a677e992d9d43a71870",
                        "installed_by": ["modules"]
                    },
                    "genomad/endtoend": {
                        "branch": "master",
                        "git_sha": "ca813f3f73adedf3547a5a677e992d9d43a71870",
                        "installed_by": ["modules"]
                    },
                    "gtdbtk/classifywf": {
                        "branch": "master",
                        "git_sha": "c67eaf89682a12966f60008a8fa30f5dd29239df",
                        "installed_by": ["modules"]
                    },
                    "gunc/downloaddb": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "gunc/mergecheckm": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "gunc/run": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "gunzip": {
                        "branch": "master",
                        "git_sha": "e06548bfa36ee31869b81041879dd6b3a83b1d57",
                        "installed_by": ["modules"]
                    },
                    "maxbin2": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "metabat2/jgisummarizebamcontigdepths": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "metabat2/metabat2": {
                        "branch": "master",
                        "git_sha": "d2e220fdec3aa2f4482c70017df4cdf8a4c94f27",
                        "installed_by": ["modules"]
                    },
                    "metaeuk/easypredict": {
                        "branch": "master",
                        "git_sha": "30d06da5bd7ae67be32758bf512cd75a4325d386",
                        "installed_by": ["modules"]
                    },
                    "mmseqs/databases": {
                        "branch": "master",
                        "git_sha": "699e078133f580548aeb43114f93ac29928c6143",
                        "installed_by": ["modules"]
                    },
                    "multiqc": {
                        "branch": "master",
                        "git_sha": "a6e11ac655e744f7ebc724be669dd568ffdc0e80",
                        "installed_by": ["modules"]
                    },
                    "prodigal": {
                        "branch": "master",
                        "git_sha": "603ecbd9f45300c9788f197d2a15a005685b4220",
                        "installed_by": ["modules"]
                    },
                    "prokka": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "pydamage/analyze": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "pydamage/filter": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "samtools/faidx": {
                        "branch": "master",
                        "git_sha": "fd742419940e01ba1c5ecb172c3e32ec840662fe",
                        "installed_by": ["modules"]
                    },
                    "seqtk/mergepe": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    },
                    "tiara/tiara": {
                        "branch": "master",
                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
                        "installed_by": ["modules"]
                    }
                }
            },
            "subworkflows": {
                "nf-core": {
                    "fasta_binning_concoct": {
                        "branch": "master",
                        "git_sha": "dedc0e31087f3306101c38835d051bf49789445a",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        }
    }
}
