/*
 * -------------------------------------------------
 *  Nextflow config file for running tests
 * -------------------------------------------------
 * Defines bundled input files and everything required
 * to run a fast and simple test. Use as follows:
 *   nextflow run nf-core/methylseq -profile test
 */

// resume: true


params {
  max_cpus = 2
  max_memory = 6.GB
  max_time = 48.h
  // Input data
  singleEnd = true
  readPaths = [
    ['SRR389222_sub1', ['https://github.com/nf-core/test-datasets/raw/methylseq/testdata/SRR389222_sub1.fastq.gz']],
    ['SRR389222_sub2', ['https://github.com/nf-core/test-datasets/raw/methylseq/testdata/SRR389222_sub2.fastq.gz']],
    ['SRR389222_sub3', ['https://github.com/nf-core/test-datasets/raw/methylseq/testdata/SRR389222_sub3.fastq.gz']]
  ]
  // Genome references
  fasta = 'https://github.com/nf-core/test-datasets/raw/methylseq/reference/genome.fa'
  fasta_index = 'https://github.com/nf-core/test-datasets/raw/methylseq/reference/genome.fa.fai'
}
