---
# yaml-language-server: $schema=https://raw.githubusercontent.com/nf-core/modules/master/modules/yaml-schema.json
name: "upd"
description: Simple software to call UPD regions from germline exome/wgs trios.
keywords:
  - upd
  - uniparental
  - disomy
tools:
  - "upd":
      description: "Simple software to call UPD regions from germline exome/wgs trios."
      homepage: https://github.com/bjhall/upd
      documentation: https://github.com/bjhall/upd
      tool_dev_url: https://github.com/bjhall/upd
      licence: "['MIT']"
input:
  # Only when we have meta
  - meta:
      type: map
      description: |
        Groovy Map containing sample information
        e.g. [ id:'test', single_end:false ]
  - vcf:
      type: file
      description: VCF file
      pattern: "*.{vcf,vcf.gz}"
output:
  - meta:
      type: map
      description: |
        Groovy Map containing sample information
        e.g. [ id:'test', single_end:false ]
  - versions:
      type: file
      description: File containing software versions
      pattern: "versions.yml"
  - bed:
      type: file
      description: BED file
      pattern: "*.{bed}"
authors:
  - "@hrydbeck"
maintainers:
  - "@hrydbeck"
