Workflows

What is a Workflow?
5 Workflows visible to you, out of a total of 7
Stable

Snakemake workflow: Isoseq3.3

Snakemake

This workflow implements the PacBio Isoseq v3.3.0 pipeline.

Note: Currently this workflow is limited to non-multiplexed samples.

Authors

  • Terry Bertozzi

Usage

If you use this workflow in a paper, don't forget to cite the URL of this (original) repository and, if available, its DOI (see above).

Step 1: Obtain a copy of this workflow

  1. Create ...

Type: Snakemake

Creator: Terry Bertozzi

Submitter: Terry Bertozzi

Work-in-progress
No description specified

Type: Nextflow

Creators: Nandan Deshpande, Georgie Samaha

Submitter: Nandan Deshpande

Stable

Assembly, visualisation and quality control workflow for high fidelity reads built from circular consensus sequence (PacBio HiFi) data.

Type: Galaxy

Creators: Gareth Price, Katherine Farquharson

Submitter: Johan Gustafsson

Stable

Assembly, visualisation and quality control workflow for high fidelity reads built from circular consensus sequence (PacBio HiFi) data.

Type: Galaxy

Creators: Gareth Price, Katherine Farquharson

Submitter: Johan Gustafsson

Assembly, visualisation and quality control workflow for high fidelity reads built from circular consensus sequence (PacBio HiFi) data.

Type: Galaxy

Creators: Gareth Price, Katherine Farquharson

Submitter: Johan Gustafsson

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