16s adna amplicon-sequencing analytical chemistry ancientdna annotation assembly atac-seq b-cell bacterial-genomes bash bibliometrics binning Bioinformatics bisulfite-sequencing C/C++ cage cage-seq cageseq-data Cheminformatics chip chip-seq chromatin-accessibiity chromatin-immunoprecipitation clinical common workflow language computer science covid-19 covid19 crispr crispr-cas9 Cytoscape Data Management data-independent-proteomics deep-variant denovo denovo-assembly dia-proteomics dna dna-methylation gene-expression genome-assembly Genomics google GTN guide-seq hla hla-typing hybrid-assembly immcantation immune immunology k-mer kmer kmer-counting kmer-frequency-count KNIME macs2 mapping Mass spectrometry mass-spectrometry Metabolomics metagenomics methyl-seq Molecular Biology nanopore nanopore-sequencing nf-core ngs-pipeline optitype pathogen-genomics peak-calling peptides personalized-medicine population-genetics Proteomics Python qiime R RetroPath rna rrna SARS-CoV-2 screening shotgun-ms Software Engineering Taverna variant-annotation variant-calling workflow composition Workflows