This workflow creates an ESet object from scRNA metadata file and EBI SCXA retrieveal
Associated Tutorial
This workflows is part of the tutorial MuSiC-Deconvolution: Data generation | sc | matrix + ESet, available in the GTN
Features
- Uses subworkflows ...
This workflow generates from only an EBI SCXA reference the metadata for creating an ESet object
Associated Tutorial
This workflows is part of the tutorial MuSiC-Deconvolution: Data generation | sc | metadata, available in the GTN
Thanks to...
Tutorial Author(s): Wendi Bacon, ...
Associated Tutorial
This workflows is part of the tutorial Inferring Trajectories with Scanpy Tutorial Workflow, available in the GTN
Features
- Includes Galaxy Workflow Tests
Thanks to...
Tutorial Author(s): [Marisa ...
This workflow creates bulk ESet objects from uploaded raw matrix & metadata files
Associated Tutorial
This workflows is part of the tutorial MuSiC-Deconvolution: Data generation | bulk | ESet, available in the GTN
Features
- Uses subworkflows ...
This workflow runs 3 comparisons using MuSiC Deconvolution compare: where datasets cell compositions are inferred from a reference containing healthy and diseased cells; where diseased are inferred from disease and healthy from healthy; and where both diseased and healthy are inferred from a healthy reference.
Associated Tutorial
This workflows is part of the tutorial MuSiC-Deconvolution: Compare, ...
Updated tool versions Aug 24 2022
Associated Tutorial
This workflows is part of the tutorial CS3_Filter, Plot and Explore Single-cell RNA-seq Data, available in the GTN
Thanks to...
Tutorial Author(s): Wendi Bacon
Tutorial Contributor(s): ...
