Workflows

What is a Workflow?
509 Workflows visible to you, out of a total of 609

Visualisation with Circos

Associated Tutorial

This workflows is part of the tutorial Circos tutorial, available in the GTN

Thanks to...

Tutorial Author(s): Saskia Hiltemann, Helena Rasche, ...

Type: Galaxy

Creators: Helena Rasche, Saskia Hiltemann

Submitter: Helena Rasche

Calling variants in non-diploid systems

Associated Tutorial

This workflows is part of the tutorial Calling variants in non-diploid systems, available in the GTN

Features

Thanks to...

Tutorial Author(s): [Anton ...

Type: Galaxy

Creators: None

Submitter: Helena Rasche

Predict variants and drug resistance from M. tuberculosis sequence samples (Illumina)

Associated Tutorial

This workflows is part of the tutorial TB Variant Analysis v1.0, available in the GTN

Features

Type: Galaxy

Creator: Peter van Heusden

Submitter: Helena Rasche

Downloads data from NCBI assuming the correct data input format. (I.e. it should be two columns, with a header, Run and Group, where Run is an SRR identifier.)

Associated Tutorial

This workflows is part of the tutorial BY-COVID: Data Download, available in the GTN

Features

  • Includes [Galaxy Workflow ...

Type: Galaxy

Creator: Helena Rasche

Submitter: Helena Rasche

gtn star logo followed by the word workflows

This workflows is part of the tutorial MuSiC-Deconvolution: Compare, available in the GTN.

About this workflow

This workflow runs 3 comparisons using MuSiC Deconvolution compare: where datasets cell compositions are ...

Type: Galaxy

Creators: Wendi Bacon, Mehmet Tekman

Submitter: Helena Rasche

No description specified

Type: Snakemake

Creators: None

Submitter: Stuart Owen

No description specified

Type: Nextflow

Creators: None

Submitter: Stuart Owen

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