Workflows

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13 Workflows visible to you, out of a total of 17
Work-in-progress

A workflow for marine Genomic Observatories data analysis

An EOSC-Life project

Build Status

The workflows developed in the framework of this project are based on pipeline-v5 of the MGnify resource.

This branch is a child of the pipeline_5.1 branch that contains all CWL descriptions of the MGnify ...

Type: Common Workflow Language

Creators: None

Submitter: Stian Soiland-Reyes

Optional workflow to purge duplicates from the contig assembly.

Infrastructure_deployment_metadata: Galaxy Australia (Galaxy)

Type: Galaxy

Creator: Gareth Price

Submitter: Stian Soiland-Reyes

An example Workflow RO-Crate, showing a Galaxy workflow with an abstract CWL description and diagram. This Crate is deliberately excessively populated to show the exensible possibilities (e.g. including a BioCompute Object and a Planemo test), refer to the Workflow RO-Crate profile for minimal requirements.

Type: Galaxy

Creator: Stian Soiland-Reyes

Submitter: Stian Soiland-Reyes

This PyCOMPSs workflow tutorial aims to illustrate the process of setting up a simulation system containing a protein, step by step, using the BioExcel Building Blocks library (biobb) in PyCOMPSs for execution on HPC. Three variants of the MD Setup workflows are included, supporting a list of structures, a list of mutations, or a cumulative set of mutations.

Type: PyCOMPSs

Creator: Adam Hospital, Pau Andrio

Submitter: Stian Soiland-Reyes

This PyCOMPSs workflow tutorial aims to illustrate the process of setting up a simulation system containing a protein, step by step, using the BioExcel Building Blocks library (biobb) in PyCOMPSs for execution on HPC. Three variants of the MD Setup workflows are included, supporting a list of structures, a list of mutations, or a cumulative set of mutations.

Type: PyCOMPSs

Creator: Adam Hospital, Pau Andrio

Submitter: Stian Soiland-Reyes

Work-in-progress

This PyCOMPSs workflow tutorial aims to illustrate the process of setting up a simulation system containing a protein, step by step, using the BioExcel Building Blocks library (biobb) in PyCOMPSs for execution on HPC. Three variants of the MD Setup workflows are included, supporting a list of structures, a list of mutations, or a cumulative set of mutations.

Type: PyCOMPSs

Creator: Adam Hospital, Pau Andrio

Submitter: Stian Soiland-Reyes

Work-in-progress

I don't even know. Only works on BSC.

Type: Common Workflow Language

Creators: None

Submitter: Stian Soiland-Reyes

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