1 item tagged with 'atac-seq'.
Introduction
nfcore/atacseq is a bioinformatics analysis pipeline used for ATAC-seq data.
The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It comes with docker containers making installation trivial and results highly reproducible.
Pipeline summary
Raw read QC (FastQC) Adapter trimming (Trim Galore!) Alignment (BWA) Mark duplicates (picard) Merge alignments from multiple libraries of the same sample (picard) ...
Created: 25th Feb 2020 at 11:01, Last updated: 25th Feb 2020 at 15:19