Finn Bacall
SEEK ID: https://dev.workflowhub.eu/people/1
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United Kingdom
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Joined: 20th Nov 2019
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Teams: Testing, Finn's test team, PNDB, LifeMonitorDev, iPC: individualizedPaediatricCure, test, Test Team, Australian BioCommons Dev, opscientia, V-pipe, UX study leave, DALiuGE workflows, Team1, UX study, My Fancy Team, Team UX Study11, My team, ux study team, UX study koehorst, Team Koehorst, UX Study (satra), Steve's UX Study Test Team, TestSaandra, KJ-workflow-test, NewTeam, team, UXStudy, A Team, UX study K, UXStudy99, Study team, Another new team, UX study2, Team 20220225, my new team, UX Study AU, Testing_proteomics, A test space (KKH), Pleiade, QSM4SENIOR, IGG-Bioinfo, Defragmentation training school, FWCC-D@HZDR, Submission Tutorial, Testing team, Galaxy Training Network, Exploring SEEK SOP functionality, MyTest, Tsinghua University BCI group, Test Team Number Nine, Eli's test team, EMBL Bioimage analysis service, Hu's Test, test 705c32e038d0, Workshop Mar 2025 Test Out, Genomics for Australian Plants, Testing RO-crate generation and submission, BSC Dev, LS Test Team, CSB, MyTestTeam, Workflow Registry LUMC, FAIRagro test
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Initial analysis of COVID-19 data using Galaxy, BioConda and public research infrastructures
Space: This Team is not associated with a Space
Public web page: https://covid19.galaxyproject.org
A community effort to collect a curated set of analysis pipelines built using Nextflow.
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Public web page: https://nf-co.re/
Concerning the administration of the Workflow Hub.
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Start date: 28th Feb 2020
Space: General
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ROR ID: Not specified
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Country: United Kingdom
City: Manchester
Web page: Not specified
ROR ID: Not specified
Department: Not specified
Country: United Kingdom
City: Manchester
Web page: Not specified
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Creator: Finn Bacall
Submitter: Finn Bacall
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Abstract (Expand)
Authors: Ove Johan Ragnar Gustafsson, Sean R. Wilkinson, Finn Bacall, Stian Soiland-Reyes, Simone Leo, Luca Pireddu, Stuart Owen, Nick Juty, José M. Fernández, Tom Brown, Hervé Ménager, Björn Grüning, Salvador Capella-Gutierrez, Frederik Coppens, Carole Goble
Date Published: 1st Dec 2025
Publication Type: Journal Article
Abstract
Authors: E. Rohmann, M. Wellenbrock, S. Hoffmann
Date Published: 1st Sep 1979
Publication Type: Journal Article
Abstract
Author: M. H. Rubinstein
Date Published: 1st Dec 1976
Publication Type: Journal Article
Abstract (Expand)
Authors: S. C. Scheiber, H. Jr Ziesat
Date Published: 11th Mar 1976
Publication Type: Journal Article
Abstract (Expand)
Authors: M. R. Keighley, P. Asquith, J. A. Edwards, J. Alexander-Williams
Date Published: 1st Oct 1975
Publication Type: Journal Article
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Creator: Finn Bacall
Submitter: Finn Bacall
A workflow to show how material from DaSch can be processed in Galaxy. The example used is a optical character recognition of a German newspaper from DaSch which will be made machine-readable, cleaned, stripped of punctuation and visualised in a Wordcloud.
Purge contigs marked as duplicates by purge_dups (could be haplotypic duplication or overlap duplication). The contigs are purged from the first assembly (hap1, pri...), added to the second assembly (hp2, alt... ), then the 2nd assembly is purged as well. If you think only one of the assemblies needs purging, use the VGP6b workflow. This workflow is the 6th workflow of the VGP pipeline. It is meant to be run after one of the contigging steps (Workflow 3, 4, or 5).
MyWorkflow
Description of the MyWorkflow repository
