Pathway Analysis
Version 1

Visit source Download RO Crate
Workflow Type: Galaxy

Galaxy workflow

SEEK ID: https://dev.workflowhub.eu/workflows/1048?version=1

Inputs

ID Name Description Type
Biomass reaction ID #main/Biomass reaction ID n/a
  • string
Cell compartment ID #main/Cell compartment ID n/a
  • string
Chassis where to produce target from #main/Chassis where to produce target from n/a
  • File
Heterologous pathways #main/Heterologous pathways n/a
  • array containing
    • File

Steps

ID Name Description
4 Flux balance analysis toolshed.g2.bx.psu.edu/repos/iuc/rpfba/rpfba/5.12.1
5 Thermo toolshed.g2.bx.psu.edu/repos/tduigou/rpthermo/rpthermo/5.12.1
6 Score Pathway toolshed.g2.bx.psu.edu/repos/tduigou/rpscore/rpscore/5.12.1
7 Rank Pathways toolshed.g2.bx.psu.edu/repos/tduigou/rpranker/rpranker/5.12.1

Outputs

ID Name Description Type
Ranked Pathways #main/Ranked Pathways n/a
  • File
_anonymous_output_1 #main/_anonymous_output_1 n/a
  • File
_anonymous_output_2 #main/_anonymous_output_2 n/a
  • File
_anonymous_output_3 #main/_anonymous_output_3 n/a
  • File

Version History

2.2 (earliest) Created 24th Apr 2024 at 10:54 by Finn Bacall

Added/updated 4 files


Open master 5a89554
help Creators and Submitter
Creators
Not specified
Submitter
License
Creative Commons Attribution 4.0 International
Activity

Views: 28

Created: 24th Apr 2024 at 10:54

Last updated: 24th Apr 2024 at 10:54

help Attributions

None

Total size: 71 KB
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