General
Web page: Not specified
Funding details: Related items
Teams: MGnify, nf-core, Workflow Hub Administration, Galaxy COVID-19, Testing, Defragmentation training school
Organizations: University of Manchester, Working from Home
Teams: Testing
Organizations: Swiss Institute of Bioinformatics
https://orcid.org/0000-0003-1361-7301
Teams: Defragmentation training school
Organizations: University of Muenster
https://orcid.org/0000-0003-4906-6724
Teams: Australian BioCommons Dev, Testing team
Organizations: SAM
https://orcid.org/0000-0001-6665-3395
Teams: Submission Tutorial
Organizations: University of Edinburgh
The images are two time points of a time lapse experiment where the INCENP gene was subjected to siRNA knock-down. The data are taken from the published mitocheck screen. In this screen the authors carried out a genome-wide phenotypic profiling of each of the ~21,000 human protein-coding genes by two-day live imaging of fluorescently labelled chromosomes.
Creator: yi.sun@embl.de
Submitter: yi.sun@embl.de
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Creator: Finn Bacall
Submitter: Finn Bacall
Abstract (Expand)
Authors: D. Holtig, G. Reiner
Date Published: 2nd Mar 2022
Publication Type: Journal
Abstract
Authors: E. Rohmann, M. Wellenbrock, S. Hoffmann
Date Published: 1st Sep 1979
Publication Type: Journal
Abstract (Expand)
Authors: M. R. Keighley, P. Asquith, J. A. Edwards, J. Alexander-Williams
Date Published: 1st Oct 1975
Publication Type: Journal
Abstract
Authors: Newcomer M, Hubbard S
Date Published: No date defined
Publication Type: Journal
Abstract
Editor:
Date Published: No date defined
Publication Type: Journal
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Creator: Finn Bacall
Submitter: Finn Bacall
Validate the NeoAntigen Candidates from FragPipe discovery through the PepQuery Novel search
Associated Tutorial
This workflows is part of the tutorial Neoantigen 4: PepQuery2 Verification, available in the GTN
Features
- Includes a Galaxy Workflow Report ...
Generating non-normal protein database for FragPipe discovery
Associated Tutorial
This workflows is part of the tutorial Neoantigen 2: Non-normal-Database-Generation, available in the GTN
Features
- Includes a Galaxy Workflow Report ...
Annotating the novel peptides
Associated Tutorial
This workflows is part of the tutorial Neoantigen 5: Variant Annotation, available in the GTN
Features
- Includes a Galaxy Workflow Report
Thanks to...
Workflow Author(s): ...
Merging Fusion and non-normal databases + Discovery peptidomics using FragPipe
Associated Tutorial
This workflows is part of the tutorial Neoantigen 3: Database merge and FragPipe discovery, available in the GTN
Features
- Includes a Galaxy Workflow Report ...
Create a protein Fusion database through the Arriba workflow
Associated Tutorial
This workflows is part of the tutorial Neoantigen 1: Fusion-Database-Generation, available in the GTN
Features
- Includes a Galaxy Workflow Report ...
Insert pdf doc here
Collection of workflows using data from the Image Data Resource (IDR) https://idr.openmicroscopy.org/
