'Biomarkers4Paris' Workflow Version 1
Visit source
Download RO CrateGalaxy workflow
Steps
| ID | Name | Description |
|---|---|---|
| 0 | Build tissue-specific expression dataset | toolshed.g2.bx.psu.edu/repos/proteore/proteore_tissue_specific_expression_data/retrieve_from_hpa/2019.02.27 |
| 1 | Build tissue-specific expression dataset | toolshed.g2.bx.psu.edu/repos/proteore/proteore_tissue_specific_expression_data/retrieve_from_hpa/2019.02.27 |
| 2 | Filter by keywords and/or numerical value | toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.05 |
| 3 | Venn diagram | toolshed.g2.bx.psu.edu/repos/proteore/proteore_venn_diagram/Jvenn/2018.12.18 |
| 4 | Cut | toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_cut_tool/1.0.0 |
| 5 | Filter by keywords and/or numerical value | toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.05 |
| 6 | Add expression data | toolshed.g2.bx.psu.edu/repos/proteore/proteore_expression_rnaseq_abbased/rna_abbased_data/2019.03.07 |
| 7 | Filter by keywords and/or numerical value | toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.05 |
| 8 | ID Converter | toolshed.g2.bx.psu.edu/repos/proteore/proteore_id_converter/IDconverter/2019.01.28 |
| 9 | Add protein features | toolshed.g2.bx.psu.edu/repos/proteore/proteore_prot_features/prot_features/2019.01.18 |
| 10 | Filter by keywords and/or numerical value | toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.05 |
| 11 | Get MS/MS observations in tissue/fluid | toolshed.g2.bx.psu.edu/repos/proteore/proteore_ms_observation_pepatlas/retr_pepatlas1/2019.02.01.1 |
| 12 | Filter by keywords and/or numerical value | toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.05 |
Version History
3 (earliest) Created 22nd Apr 2024 at 11:23 by Helena Rasche
Added/updated 3 files
Open
masterebdddcf
Creators and Submitter
Views: 32
Created: 22nd Apr 2024 at 11:23
Last updated: 22nd Apr 2024 at 11:23
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https://orcid.org/0000-0001-9760-8992
Teams: Testing, Finn's test team, PNDB, LifeMonitorDev, iPC: individualizedPaediatricCure, test, Test Team, Australian BioCommons Dev, opscientia, V-pipe, UX study leave, DALiuGE workflows, Team1, UX study, My Fancy Team, Team UX Study11, My team, ux study team, UX study koehorst, Team Koehorst, UX Study (satra), Steve's UX Study Test Team, TestSaandra, KJ-workflow-test, NewTeam, team, UXStudy, A Team, UX study K, UXStudy99, Study team, Another new team, UX study2, Team 20220225, my new team, UX Study AU, Testing_proteomics, A test space (KKH), Pleiade, QSM4SENIOR, IGG-Bioinfo, Defragmentation training school, FWCC-D@HZDR, Submission Tutorial, Testing team, Galaxy Training Network, Exploring SEEK SOP functionality, MyTest
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