Workflow constructed from history 'Hsp90-MDAnalysis'
2.0

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Workflow Type: Galaxy

High Throughput Molecular Dynamics and Analysis

Associated Tutorial

This workflows is part of the tutorial Workflow constructed from history 'Hsp90-MDAnalysis', available in the GTN

Thanks to...

Tutorial Author(s): Simon Bray, Tharindu Senapathi, Christopher Barnett, Björn Grüning

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SEEK ID: https://dev.workflowhub.eu/workflows/1062?version=1

Steps

ID Name Description
2 GROMACS structure configuration toolshed.g2.bx.psu.edu/repos/chemteam/gmx_editconf/gmx_editconf/2019.1.4
3 MDTraj file converter toolshed.g2.bx.psu.edu/repos/chemteam/md_converter/md_converter/1.9.3.2
4 RMSD Analysis toolshed.g2.bx.psu.edu/repos/chemteam/bio3d_rmsd/bio3d_rmsd/2.3.4
5 RMSF Analysis toolshed.g2.bx.psu.edu/repos/chemteam/bio3d_rmsf/bio3d_rmsf/2.3.4
6 PCA toolshed.g2.bx.psu.edu/repos/chemteam/bio3d_pca/bio3d_pca/2.3.4
7 Cosine Content toolshed.g2.bx.psu.edu/repos/chemteam/mdanalysis_cosine_analysis/mdanalysis_cosine_analysis/0.20
8 PCA visualization toolshed.g2.bx.psu.edu/repos/chemteam/bio3d_pca_visualize/bio3d_pca_visualize/2.3.4
9 Hydrogen Bond Analysis using VMD toolshed.g2.bx.psu.edu/repos/chemteam/vmd_hbonds/vmd_hbonds/1.9.3
10 RMSD Analysis toolshed.g2.bx.psu.edu/repos/chemteam/bio3d_rmsd/bio3d_rmsd/2.3.4

Version History

2.0 (earliest) Created 25th Jun 2024 at 10:53 by Helena Rasche

Added/updated 4 files


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Activity

Views: 405   Downloads: 104

Created: 25th Jun 2024 at 10:53

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