WGS Part In "Analyses Of Metagenomics Data - The Global Picture"
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Analyses of metagenomics data - The global picture

Associated Tutorial

This workflows is part of the tutorial WGS Part In "Analyses Of Metagenomics Data - The Global Picture", available in the GTN

Thanks to...

Tutorial Author(s): Saskia Hiltemann, Bérénice Batut

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SEEK ID: https://dev.workflowhub.eu/workflows/1067?version=1

Steps

ID Name Description
1 MetaPhlAn2 toolshed.g2.bx.psu.edu/repos/iuc/metaphlan2/metaphlan2/2.6.0.0
2 Format MetaPhlAn2 toolshed.g2.bx.psu.edu/repos/iuc/metaphlan2krona/metaphlan2krona/2.6.0.0
3 HUMAnN2 toolshed.g2.bx.psu.edu/repos/iuc/humann2/humann2/0.9.9.0
4 Krona pie chart toolshed.g2.bx.psu.edu/repos/crs4/taxonomy_krona_chart/taxonomy_krona_chart/2.6.1
5 Renormalize toolshed.g2.bx.psu.edu/repos/iuc/humann2_renorm_table/humann2_renorm_table/0.9.9.0
6 Regroup toolshed.g2.bx.psu.edu/repos/iuc/humann2_regroup_table/humann2_regroup_table/0.9.9.0
7 Renormalize toolshed.g2.bx.psu.edu/repos/iuc/humann2_renorm_table/humann2_renorm_table/0.9.9.0

Version History

1.0 (earliest) Created 25th Jun 2024 at 10:53 by Helena Rasche

Added/updated 4 files


Open master dfa24f7
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GTN Matrix
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MetaPhlAn
HUMAnN2
taxonomy_krona_chart
License
Creative Commons Attribution 4.0 International
Activity

Views: 334   Downloads: 89

Created: 25th Jun 2024 at 10:53

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Total size: 52.1 KB
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