Workflow7: Beta Diversity [Galaxy Training: 16S Microbial Analysis With Mothur]
1.0

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Workflow Type: Galaxy

16S Microbial Analysis with mothur (short)

Associated Tutorial

This workflows is part of the tutorial Workflow7: Beta Diversity [Galaxy Training: 16S Microbial Analysis With Mothur], available in the GTN

Thanks to...

Tutorial Author(s): Saskia Hiltemann, Bérénice Batut, Dave Clements

Workflow Author(s): Saskia Hiltemann

gtn star logo followed by the word workflows

SEEK ID: https://dev.workflowhub.eu/workflows/1117?version=1

Inputs

ID Name Description Type
Shared file from Make.shared #main/Shared file from Make.shared n/a
  • File
Sub.sample shared #main/Sub.sample shared n/a
  • array containing
    • File

Steps

ID Name Description
2 Dist.shared toolshed.g2.bx.psu.edu/repos/iuc/mothur_dist_shared/mothur_dist_shared/1.39.5.0
3 Collapse Collection toolshed.g2.bx.psu.edu/repos/nml/collapse_collections/collapse_dataset/4.2
4 Heatmap.sim toolshed.g2.bx.psu.edu/repos/iuc/mothur_heatmap_sim/mothur_heatmap_sim/1.39.5.0
5 Tree.shared toolshed.g2.bx.psu.edu/repos/iuc/mothur_tree_shared/mothur_tree_shared/1.39.5.0
6 Venn toolshed.g2.bx.psu.edu/repos/iuc/mothur_venn/mothur_venn/1.39.5.0
7 Newick Display toolshed.g2.bx.psu.edu/repos/iuc/newick_utils/newick_display/1.6+galaxy1

Outputs

ID Name Description Type
_anonymous_output_1 #main/_anonymous_output_1 n/a
  • File
_anonymous_output_2 #main/_anonymous_output_2 n/a
  • File
_anonymous_output_3 #main/_anonymous_output_3 n/a
  • File
_anonymous_output_4 #main/_anonymous_output_4 n/a
  • File
_anonymous_output_5 #main/_anonymous_output_5 n/a
  • File

Version History

1.0 (earliest) Created 25th Jun 2024 at 10:59 by Helena Rasche

Added/updated 4 files


Open master d399710
help Creators and Submitter
Creators
Not specified
Submitter
Discussion Channel
GTN Matrix
Tools
mothur
Newick Utilities
License
MIT License
Activity

Views: 304   Downloads: 88

Created: 25th Jun 2024 at 10:59

Last updated: 25th Jun 2024 at 10:59

help Attributions

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Total size: 43.8 KB
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