Workflow 4: Mock OTU Clustering [Galaxy Training: 16S Microbial Analysis With Mothur]
1.0

Workflow Type: Galaxy

16S Microbial Analysis with mothur (short)

Associated Tutorial

This workflows is part of the tutorial Workflow 4: Mock OTU Clustering [Galaxy Training: 16S Microbial Analysis With Mothur], available in the GTN

Thanks to...

Tutorial Author(s): Saskia Hiltemann, Bérénice Batut, Dave Clements

Workflow Author(s): Saskia Hiltemann

gtn star logo followed by the word workflows

Inputs

ID Name Description Type
Mock Count Table #main/Mock Count Table n/a
  • File
Mock Sequences #main/Mock Sequences n/a
  • File

Steps

ID Name Description
2 Dist.seqs toolshed.g2.bx.psu.edu/repos/iuc/mothur_dist_seqs/mothur_dist_seqs/1.39.5.0
3 Cluster toolshed.g2.bx.psu.edu/repos/iuc/mothur_cluster/mothur_cluster/1.39.5.0
4 Make.shared toolshed.g2.bx.psu.edu/repos/iuc/mothur_make_shared/mothur_make_shared/1.39.5.0
5 Rarefaction.single toolshed.g2.bx.psu.edu/repos/iuc/mothur_rarefaction_single/mothur_rarefaction_single/1.39.5.0

Outputs

ID Name Description Type
_anonymous_output_1 #main/_anonymous_output_1 n/a
  • File
_anonymous_output_2 #main/_anonymous_output_2 n/a
  • File
_anonymous_output_3 #main/_anonymous_output_3 n/a
  • File
_anonymous_output_4 #main/_anonymous_output_4 n/a
  • File
_anonymous_output_5 #main/_anonymous_output_5 n/a
  • File
_anonymous_output_6 #main/_anonymous_output_6 n/a
  • File

Version History

1.0 (earliest) Created 25th Jun 2024 at 11:00 by Helena Rasche

Added/updated 4 files


Open master 428e823
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Views: 144   Downloads: 47

Created: 25th Jun 2024 at 11:00

Last updated: 25th Jun 2024 at 11:00

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