Workflow 4: Mock OTU Clustering [Galaxy Training: 16S Microbial Analysis With Mothur] 1.0
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Download RO-Crate16S Microbial Analysis with mothur (short)
Associated Tutorial
This workflows is part of the tutorial Workflow 4: Mock OTU Clustering [Galaxy Training: 16S Microbial Analysis With Mothur], available in the GTN
Thanks to...
Tutorial Author(s): Saskia Hiltemann, Bérénice Batut, Dave Clements
Workflow Author(s): Saskia Hiltemann
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| Mock Count Table | #main/Mock Count Table | n/a |
|
| Mock Sequences | #main/Mock Sequences | n/a |
|
Steps
| ID | Name | Description |
|---|---|---|
| 2 | Dist.seqs | toolshed.g2.bx.psu.edu/repos/iuc/mothur_dist_seqs/mothur_dist_seqs/1.39.5.0 |
| 3 | Cluster | toolshed.g2.bx.psu.edu/repos/iuc/mothur_cluster/mothur_cluster/1.39.5.0 |
| 4 | Make.shared | toolshed.g2.bx.psu.edu/repos/iuc/mothur_make_shared/mothur_make_shared/1.39.5.0 |
| 5 | Rarefaction.single | toolshed.g2.bx.psu.edu/repos/iuc/mothur_rarefaction_single/mothur_rarefaction_single/1.39.5.0 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| _anonymous_output_1 | #main/_anonymous_output_1 | n/a |
|
| _anonymous_output_2 | #main/_anonymous_output_2 | n/a |
|
| _anonymous_output_3 | #main/_anonymous_output_3 | n/a |
|
| _anonymous_output_4 | #main/_anonymous_output_4 | n/a |
|
| _anonymous_output_5 | #main/_anonymous_output_5 | n/a |
|
| _anonymous_output_6 | #main/_anonymous_output_6 | n/a |
|
Version History
1.0 (earliest) Created 25th Jun 2024 at 11:00 by Helena Rasche
Added/updated 4 files
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master428e823
Creators and Submitter
Views: 421 Downloads: 100
Created: 25th Jun 2024 at 11:00
Last updated: 25th Jun 2024 at 11:00
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