May19 EncyclopeDIA raw inputs
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Download RO-Crateencyclopedia
Associated Tutorial
This workflows is part of the tutorial May19 EncyclopeDIA raw inputs, available in the GTN
Thanks to...
Tutorial Author(s): Emma Leith, Subina Mehta, James Johnson, Pratik Jagtap, Timothy J. Griffin
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| BACKGROUND PROTEIN FASTA FILE | #main/BACKGROUND PROTEIN FASTA FILE | n/a |
|
| EXPERIMENTAL DIA mzML FILES (WIDE) | #main/EXPERIMENTAL DIA mzML FILES (WIDE) | n/a |
|
| GPF DIA mzML Files (Dataset collection) | #main/GPF DIA mzML Files (Dataset collection) | encyclopedia |
|
| SPECTRAL OR PROSIT LIBRARY | #main/SPECTRAL OR PROSIT LIBRARY | n/a |
|
Steps
| ID | Name | Description |
|---|---|---|
| 4 | msconvert | toolshed.g2.bx.psu.edu/repos/galaxyp/msconvert/msconvert/3.0.20287.2 |
| 5 | msconvert | toolshed.g2.bx.psu.edu/repos/galaxyp/msconvert/msconvert/3.0.20287.2 |
| 6 | SearchToLib | toolshed.g2.bx.psu.edu/repos/galaxyp/encyclopedia_searchtolib/encyclopedia_searchtolib/1.2.2+galaxy0 |
| 7 | EncyclopeDIA Quantify | toolshed.g2.bx.psu.edu/repos/galaxyp/encyclopedia_quantify/encyclopedia_quantify/1.2.2+galaxy0 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| _anonymous_output_1 | #main/_anonymous_output_1 | n/a |
|
| _anonymous_output_2 | #main/_anonymous_output_2 | n/a |
|
| _anonymous_output_3 | #main/_anonymous_output_3 | n/a |
|
| _anonymous_output_4 | #main/_anonymous_output_4 | n/a |
|
| _anonymous_output_5 | #main/_anonymous_output_5 | n/a |
|
| _anonymous_output_6 | #main/_anonymous_output_6 | n/a |
|
| _anonymous_output_7 | #main/_anonymous_output_7 | n/a |
|
Version History
1.0 (latest) Created 16th Jul 2024 at 14:07 by Helena Rasche
Added/updated 4 files
Open
mastera09fe37
4.0 (earliest) Created 25th Jun 2024 at 11:03 by Helena Rasche
Added/updated 4 files
Frozen
4.0144d8a5
Creators and Submitter
Views: 199 Downloads: 80
Created: 25th Jun 2024 at 11:03
Last updated: 25th Jun 2024 at 11:03
Tags AttributionsNone
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