Assess genome quality - upgraded
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Download RO-Crate
Run on GalaxyAssociated Tutorial
This workflows is part of the tutorial Assess genome quality - upgraded, available in the GTN
Features
- Includes a Galaxy Workflow Report
Thanks to...
Tutorial Author(s): Anna Syme
Workflow Author(s): Anna Syme
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| Polished assembly | Polished assembly | n/a |
|
| Reference genome | Reference genome | n/a |
|
Steps
| ID | Name | Description |
|---|---|---|
| 2 | Busco: assess assembly | toolshed.g2.bx.psu.edu/repos/iuc/busco/busco/5.5.0+galaxy0 |
| 3 | Quast: assess assembly | toolshed.g2.bx.psu.edu/repos/iuc/quast/quast/5.2.0+galaxy1 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| Busco short summary | Busco short summary | n/a |
|
| _anonymous_output_1 | _anonymous_output_1 | n/a |
|
| Quast on input dataset(s): HTML report | Quast on input dataset(s): HTML report | n/a |
|
Version History
2.0 (latest) Created 16th Jul 2024 at 14:08 by Helena Rasche
Added/updated 4 files
Open
mastera404826
4.0 (earliest) Created 25th Jun 2024 at 11:04 by Helena Rasche
Added/updated 4 files
Frozen
4.0d0a40d3
Creators and Submitter
Views: 1283 Downloads: 507 Runs: 0
Created: 25th Jun 2024 at 11:04
Last updated: 25th Jun 2024 at 11:04
AttributionsNone
Related items
https://orcid.org/0000-0001-9760-8992
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