Functional annotation
1.0

Visit source

Download RO-Crate

Workflow Type: Galaxy

Functional annotation of protein sequences

Associated Tutorial

This workflows is part of the tutorial Functional annotation, available in the GTN

Features

Includes Galaxy Workflow Tests

Thanks to...

Tutorial Author(s): Anthony Bretaudeau

Workflow Author(s): Anthony Bretaudeau

Funder(s): Gallantries: Bridging Training Communities in Life Science, Environment and Health, EuroScienceGateway

SEEK ID: https://dev.workflowhub.eu/workflows/1183?version=1

Inputs

ID	Name	Description	Type
Protein sequences	#main/Protein sequences	Some protein sequences to functionally annotate	File

Steps

ID	Name	Description
1	eggNOG Mapper	toolshed.g2.bx.psu.edu/repos/galaxyp/eggnog_mapper/eggnog_mapper/2.1.8+galaxy3
2	InterProScan	toolshed.g2.bx.psu.edu/repos/bgruening/interproscan/interproscan/5.59-91.0+galaxy3

Outputs

ID	Name	Description	Type
_anonymous_output_1	#main/_anonymous_output_1	n/a	File
_anonymous_output_2	#main/_anonymous_output_2	n/a	File

Version History

1.0 (earliest) Created 25th Jun 2024 at 11:07 by Helena Rasche

Added/updated 4 files

Open master 6e0c127

Creators and Submitter

Creators

Not specified

Submitter

Helena Rasche

Discussion Channel

GTN Matrix

Tools

eggNOG-mapper v2

InterProScan (EBI)

License

GNU General Public License v3.0 or later

Activity

Views: 396 Downloads: 108

Created: 25th Jun 2024 at 11:07

Last updated: 25th Jun 2024 at 11:07

Functional annotation 1.0