Workflow Type: Galaxy
Open
Mass spectrometry imaging: Loading and exploring MSI data
Associated Tutorial
This workflows is part of the tutorial MS Imaging Loading Exploring Data, available in the GTN
Thanks to...
Tutorial Author(s): Melanie Föll, Björn Grüning
Inputs
ID | Name | Description | Type |
---|---|---|---|
internal calibrants.tab | internal calibrants.tab | n/a |
|
mouse_kidney_cut.i | mouse_kidney_cut.i | n/a |
|
Steps
ID | Name | Description |
---|---|---|
2 | MSI data exporter | toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_data_exporter/cardinal_data_exporter/1.12.1.1 |
3 | MSI Qualitycontrol | toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_quality_report/cardinal_quality_report/1.12.1.2 |
4 | Sort | toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sort_header_tool/1.1.1 |
5 | Select | Grep1 |
Version History
4.0 (earliest) Created 25th Jun 2024 at 11:07 by Helena Rasche
Added/updated 4 files
Open
master
fcae4a9
![help](/assets/famfamfam_silk/information-8cfe563be76fb11b27c8ba778f5d40ce6800b244d6ca58ef6e9973308efbe534.png)
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Views: 140 Downloads: 47
Created: 25th Jun 2024 at 11:07
Last updated: 25th Jun 2024 at 11:07
![help](/assets/famfamfam_silk/information-8cfe563be76fb11b27c8ba778f5d40ce6800b244d6ca58ef6e9973308efbe534.png)
![help](/assets/famfamfam_silk/information-8cfe563be76fb11b27c8ba778f5d40ce6800b244d6ca58ef6e9973308efbe534.png)
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