Workflow Type: Galaxy
Open
Mass spectrometry imaging: Loading and exploring MSI data
Associated Tutorial
This workflows is part of the tutorial MS Imaging Loading Exploring Data, available in the GTN
Thanks to...
Tutorial Author(s): Melanie Föll, Björn Grüning
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| internal calibrants.tab | internal calibrants.tab | n/a |
|
| mouse_kidney_cut.i | mouse_kidney_cut.i | n/a |
|
Steps
| ID | Name | Description |
|---|---|---|
| 2 | MSI data exporter | toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_data_exporter/cardinal_data_exporter/1.12.1.1 |
| 3 | MSI Qualitycontrol | toolshed.g2.bx.psu.edu/repos/galaxyp/cardinal_quality_report/cardinal_quality_report/1.12.1.2 |
| 4 | Sort | toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sort_header_tool/1.1.1 |
| 5 | Select | Grep1 |
Version History
4.0 (earliest) Created 25th Jun 2024 at 11:07 by Helena Rasche
Added/updated 4 files
Open
master
fcae4a9
Creators and SubmitterCreators
Not specifiedSubmitter
Discussion Channel
Tool
Activity
Views: 998 Downloads: 300 Runs: 0
Created: 25th Jun 2024 at 11:07
Last updated: 25th Jun 2024 at 11:07
Tags
AttributionsNone
Visit source
Run on Galaxy
https://orcid.org/0000-0001-9760-8992