Blockclust 1.1.0 Clustering
4.0

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Workflow Type: Galaxy

Small Non-coding RNA Clustering using BlockClust

Associated Tutorial

This workflows is part of the tutorial Blockclust 1.1.0 Clustering, available in the GTN

Features

Thanks to...

Tutorial Author(s): Pavankumar Videm

gtn star logo followed by the word workflows

SEEK ID: https://dev.workflowhub.eu/workflows/1333?version=1

Inputs

ID Name Description Type
blockclust_input #main/blockclust_input n/a
  • File

Steps

ID Name Description
1 Samtools sort toolshed.g2.bx.psu.edu/repos/devteam/samtools_sort/samtools_sort/2.0.2
2 BlockClust toolshed.g2.bx.psu.edu/repos/rnateam/blockclust/blockclust/1.1.0
3 Sort toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_sort_header_tool/1.1.1
4 blockbuster toolshed.g2.bx.psu.edu/repos/rnateam/blockbuster/blockbuster/0.1.2
5 BlockClust toolshed.g2.bx.psu.edu/repos/rnateam/blockclust/blockclust/1.1.0

Outputs

ID Name Description Type
blockbuster_out #main/blockbuster_out n/a
  • File
clusters_bed #main/clusters_bed n/a
  • File
model_based_pred_bed #main/model_based_pred_bed n/a
  • File
tags_bed #main/tags_bed n/a
  • File

Version History

4.0 (earliest) Created 25th Jun 2024 at 11:25 by Helena Rasche

Added/updated 4 files


Open master 0e3b12a
help Creators and Submitter
Creators
Not specified
Submitter
Discussion Channel
GTN Matrix
Tools
SAMtools
blockbuster
License
Creative Commons Attribution 4.0 International
Activity

Views: 486   Downloads: 125

Created: 25th Jun 2024 at 11:25

Last updated: 25th Jun 2024 at 11:25

help Attributions

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Total size: 54.4 KB
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