COVID-19: SE Variation
Version 1

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Workflow Type: Common Workflow Language

Abstract CWL generated from Galaxy: COVID-19: SE Variation

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SEEK ID: https://dev.workflowhub.eu/workflows/48?version=1

Inputs

ID Name Description Type
0_Input Dataset Collection n/a n/a
  • File
NC_045512 n/a n/a
  • File

Steps

ID Name Description
10_Call variants n/a n/a
11_SnpEff eff n/a n/a
12_SnpSift Extract Fields n/a n/a
13_Collapse Collection n/a n/a
2_fastp n/a n/a
3_SnpEff build n/a n/a
4_MultiQC n/a n/a
5_Bowtie2 n/a n/a
6_MultiQC n/a n/a
7_MarkDuplicates n/a n/a
8_MultiQC n/a n/a
9_Realign reads n/a n/a

Version History

Version 1 (earliest) Created 27th Mar 2020 at 15:02 by Ignacio Eguinoa

Added/updated 1 files


Open master a060c46
help Creators and Submitter
Creator
Submitter
License
Apache License 2.0 (Apache-2.0)
Activity

Views: 2306   Downloads: 729

Created: 27th Mar 2020 at 15:02

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Total size: 5.88 KB
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