Galaxy Introduction Peaks2Genes - Part 1
Version 1

Visit source Download RO Crate
Workflow Type: Galaxy

Galaxy workflow

SEEK ID: https://dev.workflowhub.eu/workflows/821?version=1

Inputs

ID Name Description Type
Genes Genes n/a
  • File
Peaks Peaks n/a
  • File

Steps

ID Name Description
2 Select last toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_tail_tool/1.1.0
3 Replace Text toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_replace_in_column/1.1.3
4 Get flanks toolshed.g2.bx.psu.edu/repos/devteam/get_flanks/get_flanks1/1.0.0
5 Replace Text toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_replace_in_column/1.1.3
6 Replace Text toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_replace_in_column/1.1.3
7 Convert Genomic Intervals To BED CONVERTER_interval_to_bed_0
8 Intersect toolshed.g2.bx.psu.edu/repos/devteam/intersect/gops_intersect_1/1.0.0
9 Group Grouping1

Outputs

ID Name Description Type
chr_count chr_count n/a
  • File

Version History

1 (earliest) Created 22nd Apr 2024 at 10:33 by Helena Rasche

Added/updated 3 files


Open master bc820c6
help Creators and Submitter
Creators
Not specified
Submitter
Tool
bx-python
License
Creative Commons Attribution 4.0 International
Activity

Views: 47

Created: 22nd Apr 2024 at 10:33

Last updated: 22nd Apr 2024 at 10:33

help Attributions

None

Total size: 17.9 KB
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