RepeatMasker
Version 1

Visit source Download RO Crate
Workflow Type: Galaxy

Galaxy workflow

SEEK ID: https://dev.workflowhub.eu/workflows/888?version=1

Inputs

ID Name Description Type
Raw genome sequence #main/Raw genome sequence The raw (not masked) genome sequence in fasta format
  • File

Steps

ID Name Description
1 Red toolshed.g2.bx.psu.edu/repos/iuc/red/red/2018.09.10+galaxy1
2 RepeatMasker toolshed.g2.bx.psu.edu/repos/bgruening/repeat_masker/repeatmasker_wrapper/4.1.5+galaxy0

Outputs

ID Name Description Type
RepeatMasker masked sequence on input dataset(s) #main/RepeatMasker masked sequence on input dataset(s) n/a
  • File
RepeatMasker output log on input dataset(s) #main/RepeatMasker output log on input dataset(s) n/a
  • File
RepeatMasker repeat catalogue on input dataset(s) #main/RepeatMasker repeat catalogue on input dataset(s) n/a
  • File
RepeatMasker repeat statistics on input dataset(s) #main/RepeatMasker repeat statistics on input dataset(s) n/a
  • File
_anonymous_output_1 #main/_anonymous_output_1 n/a
  • File
_anonymous_output_2 #main/_anonymous_output_2 n/a
  • File

Version History

1 (earliest) Created 22nd Apr 2024 at 10:50 by Helena Rasche

Added/updated 3 files


Open master 108dc34
help Creators and Submitter
Creator
  • Anthony Bretaudeau
Submitter
Tools
RED
RepeatMasker
License
GNU General Public License v3.0 or later
Activity

Views: 48

Created: 22nd Apr 2024 at 10:50

Last updated: 22nd Apr 2024 at 10:50

help Attributions

None

Total size: 11.3 KB
Powered by
 (v.1.15.0-pre)
About Dev WorkflowHub | Acknowledgements | Credits | Terms & Conditions | Privacy Policy
Copyright © 2008 - 2024 The University of Manchester and HITS gGmbH