Workflow 3: Classification [Galaxy Training: 16S Microbial Analysis With Mothur]
Version 1

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Workflow Type: Galaxy

Galaxy workflow

SEEK ID: https://dev.workflowhub.eu/workflows/906?version=1

Inputs

ID Name Description Type
Cleaned Sequences #main/Cleaned Sequences n/a
  • File
Count Table #main/Count Table n/a
  • File
Training set FASTA #main/Training set FASTA n/a
  • File
Training set Taxonomy #main/Training set Taxonomy n/a
  • File

Steps

ID Name Description
4 Classify.seqs toolshed.g2.bx.psu.edu/repos/iuc/mothur_classify_seqs/mothur_classify_seqs/1.39.5.0
5 Remove.lineage toolshed.g2.bx.psu.edu/repos/iuc/mothur_remove_lineage/mothur_remove_lineage/1.39.5.0
6 Summary.seqs toolshed.g2.bx.psu.edu/repos/iuc/mothur_summary_seqs/mothur_summary_seqs/1.39.5.0

Outputs

ID Name Description Type
_anonymous_output_1 #main/_anonymous_output_1 n/a
  • File
_anonymous_output_2 #main/_anonymous_output_2 n/a
  • File
_anonymous_output_3 #main/_anonymous_output_3 n/a
  • File
_anonymous_output_4 #main/_anonymous_output_4 n/a
  • File
_anonymous_output_5 #main/_anonymous_output_5 n/a
  • File
_anonymous_output_6 #main/_anonymous_output_6 n/a
  • File
_anonymous_output_7 #main/_anonymous_output_7 n/a
  • File
_anonymous_output_8 #main/_anonymous_output_8 n/a
  • File

Version History

1 (earliest) Created 22nd Apr 2024 at 11:03 by Helena Rasche

Added/updated 3 files


Open master 20d1b09
help Creators and Submitter
Creator
  • Saskia Hiltemann
Submitter
Tool
mothur
License
MIT License
Activity

Views: 29

Created: 22nd Apr 2024 at 11:03

Last updated: 22nd Apr 2024 at 11:03

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Total size: 17.6 KB
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