sRNA Seq Step 2: Salmon And DESeq2
Version 1

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SEEK ID: https://dev.workflowhub.eu/workflows/957?version=1

Steps

ID Name Description
4 Salmon Salmon quantification on control datasets calculating SF/sense hits toolshed.g2.bx.psu.edu/repos/bgruening/salmon/salmon/0.8.2
5 Salmon Salmon quantification on control datasets calculating SR/antisense hits toolshed.g2.bx.psu.edu/repos/bgruening/salmon/salmon/0.8.2
6 Salmon Salmon quantification on case datasets calculating SF/sense hits toolshed.g2.bx.psu.edu/repos/bgruening/salmon/salmon/0.8.2
7 Salmon Salmon quantification on case datasets calculating SR/antisense hits toolshed.g2.bx.psu.edu/repos/bgruening/salmon/salmon/0.8.2
8 DESeq2 Calculating differential abundance of SF/sense hits toolshed.g2.bx.psu.edu/repos/iuc/deseq2/deseq2/2.11.39
9 DESeq2 Calculating differential abundance of SR/antisense hits toolshed.g2.bx.psu.edu/repos/iuc/deseq2/deseq2/2.11.39
10 Filter Filter1
11 Filter Filter1

Version History

3 (earliest) Created 22nd Apr 2024 at 11:10 by Helena Rasche

Added/updated 3 files


Open master 2d11ce8
help Creators and Submitter
Creators
Not specified
Submitter
Tools
Salmon
DESeq2
License
Creative Commons Attribution 4.0 International
Activity

Views: 47

Created: 22nd Apr 2024 at 11:10

Last updated: 22nd Apr 2024 at 11:10

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Total size: 31.4 KB
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