Assess genome quality
Version 1

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Workflow Type: Galaxy

Galaxy workflow

SEEK ID: https://dev.workflowhub.eu/workflows/990?version=1

Inputs

ID Name Description Type
Polished assembly Polished assembly n/a
  • File
Reference genome Reference genome n/a
  • File

Steps

ID Name Description
2 Busco: assess assembly toolshed.g2.bx.psu.edu/repos/iuc/busco/busco/5.2.2+galaxy0
3 Quast: assess assembly toolshed.g2.bx.psu.edu/repos/iuc/quast/quast/5.0.2+galaxy1

Outputs

ID Name Description Type
_anonymous_output_1 _anonymous_output_1 n/a
  • File
Busco summary image Busco summary image n/a
  • File
_anonymous_output_2 _anonymous_output_2 n/a
  • File
Busco short summary Busco short summary n/a
  • File
Quast on input dataset(s): Log Quast on input dataset(s): Log n/a
  • File
_anonymous_output_3 _anonymous_output_3 n/a
  • File
Quast on input dataset(s): PDF report Quast on input dataset(s): PDF report n/a
  • File
Quast on input dataset(s): tabular report Quast on input dataset(s): tabular report n/a
  • File
Quast on input dataset(s): HTML report Quast on input dataset(s): HTML report n/a
  • File
_anonymous_output_4 _anonymous_output_4 n/a
  • File

Version History

2 (earliest) Created 22nd Apr 2024 at 11:14 by Helena Rasche

Added/updated 3 files


Open master eef31a3
help Creators and Submitter
Creator
  • Anna Syme
Submitter
Tools
BUSCO
QUAST
License
Creative Commons Attribution 4.0 International
Activity

Views: 21

Created: 22nd Apr 2024 at 11:14

Last updated: 22nd Apr 2024 at 11:14

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Total size: 14.9 KB
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