Workflow Type: Galaxy
Open
Galaxy workflow
Inputs
ID | Name | Description | Type |
---|---|---|---|
Input alignment | #main/Input alignment | Alignment in fasta format, containing variable positions from variant calling |
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Steps
ID | Name | Description |
---|---|---|
1 | RStudio | Use R to visualize a phylogenetic tree interactive_tool_rstudio |
2 | Estimate phylogeny with RAxML | Maximum likelihood-based inference of a phylogenetic tree toolshed.g2.bx.psu.edu/repos/iuc/raxml/raxml/8.2.4+galaxy2 |
Outputs
ID | Name | Description | Type |
---|---|---|---|
Best-scoring ML Tree | #main/Best-scoring ML Tree | n/a |
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Info | #main/Info | n/a |
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Version History
3 (earliest) Created 22nd Apr 2024 at 11:18 by Helena Rasche
Added/updated 3 files
Open
master
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Tool
Activity
Views: 532 Downloads: 130
Created: 22nd Apr 2024 at 11:18
Last updated: 22nd Apr 2024 at 11:18
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