Workflow Type: Galaxy

Associated Tutorial

This workflows is part of the tutorial Assembly polishing - upgraded, available in the GTN

Features

Thanks to...

Tutorial Author(s): Anna Syme

Workflow Author(s): Anna Syme

gtn star logo followed by the word workflows

Steps

ID Name Description
4 Racon polish with long reads, x4 - upgraded n/a
5 Medaka polish toolshed.g2.bx.psu.edu/repos/iuc/medaka_consensus_pipeline/medaka_consensus_pipeline/1.7.2+galaxy1
6 Fasta statistics after Racon long read polish toolshed.g2.bx.psu.edu/repos/iuc/fasta_stats/fasta-stats/2.0
7 Fasta statistics after Medaka polish toolshed.g2.bx.psu.edu/repos/iuc/fasta_stats/fasta-stats/2.0
8 Racon polish with Illumina reads (R1 only), x2 - upgraded n/a
9 Fasta statistics after Racon short read polish toolshed.g2.bx.psu.edu/repos/iuc/fasta_stats/fasta-stats/2.0

Version History

2.0 (latest) Created 16th Jul 2024 at 14:08 by Helena Rasche

Added/updated 4 files


Open master d1d3a97

4.0 (earliest) Created 25th Jun 2024 at 11:06 by Helena Rasche

Added/updated 4 files


Frozen 4.0 f836489
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Views: 439   Downloads: 157

Created: 25th Jun 2024 at 11:06

Last updated: 25th Jun 2024 at 11:06

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