Workflow Type: Galaxy
Open
Frozen
Associated Tutorial
This workflows is part of the tutorial Assembly polishing - upgraded, available in the GTN
Features
- Includes a Galaxy Workflow Report
- Uses subworkflows
Thanks to...
Tutorial Author(s): Anna Syme
Workflow Author(s): Anna Syme
Steps
ID | Name | Description |
---|---|---|
4 | Racon polish with long reads, x4 - upgraded | n/a |
5 | Medaka polish | toolshed.g2.bx.psu.edu/repos/iuc/medaka_consensus_pipeline/medaka_consensus_pipeline/1.7.2+galaxy1 |
6 | Fasta statistics after Racon long read polish | toolshed.g2.bx.psu.edu/repos/iuc/fasta_stats/fasta-stats/2.0 |
7 | Fasta statistics after Medaka polish | toolshed.g2.bx.psu.edu/repos/iuc/fasta_stats/fasta-stats/2.0 |
8 | Racon polish with Illumina reads (R1 only), x2 - upgraded | n/a |
9 | Fasta statistics after Racon short read polish | toolshed.g2.bx.psu.edu/repos/iuc/fasta_stats/fasta-stats/2.0 |
Version History
2.0 (latest) Created 16th Jul 2024 at 14:08 by Helena Rasche
Added/updated 4 files
Open
master
d1d3a97
4.0 (earliest) Created 25th Jun 2024 at 11:06 by Helena Rasche
Added/updated 4 files
Frozen
4.0
f836489
Creators and Submitter
Creators
Not specifiedSubmitter
Discussion Channel
Tool
Activity
Views: 440 Downloads: 157
Created: 25th Jun 2024 at 11:06
Last updated: 25th Jun 2024 at 11:06
Attributions
None