'Biomarkers4Paris' Workflow 3.0
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Download RO-CrateBiomarker candidate identification
Associated Tutorial
This workflows is part of the tutorial 'Biomarkers4Paris' Workflow, available in the GTN
Thanks to...
Tutorial Author(s): Florence Combes, David Christiany, Valentin Loux, Yves Vandenbrouck
Steps
| ID | Name | Description |
|---|---|---|
| 0 | Build tissue-specific expression dataset | toolshed.g2.bx.psu.edu/repos/proteore/proteore_tissue_specific_expression_data/retrieve_from_hpa/2019.02.27 |
| 1 | Build tissue-specific expression dataset | toolshed.g2.bx.psu.edu/repos/proteore/proteore_tissue_specific_expression_data/retrieve_from_hpa/2019.02.27 |
| 2 | Filter by keywords and/or numerical value | toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.05 |
| 3 | Venn diagram | toolshed.g2.bx.psu.edu/repos/proteore/proteore_venn_diagram/Jvenn/2018.12.18 |
| 4 | Cut | toolshed.g2.bx.psu.edu/repos/bgruening/text_processing/tp_cut_tool/1.0.0 |
| 5 | Filter by keywords and/or numerical value | toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.05 |
| 6 | Add expression data | toolshed.g2.bx.psu.edu/repos/proteore/proteore_expression_rnaseq_abbased/rna_abbased_data/2019.03.07 |
| 7 | Filter by keywords and/or numerical value | toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.05 |
| 8 | ID Converter | toolshed.g2.bx.psu.edu/repos/proteore/proteore_id_converter/IDconverter/2019.01.28 |
| 9 | Add protein features | toolshed.g2.bx.psu.edu/repos/proteore/proteore_prot_features/prot_features/2019.01.18 |
| 10 | Filter by keywords and/or numerical value | toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.05 |
| 11 | Get MS/MS observations in tissue/fluid | toolshed.g2.bx.psu.edu/repos/proteore/proteore_ms_observation_pepatlas/retr_pepatlas1/2019.02.01.1 |
| 12 | Filter by keywords and/or numerical value | toolshed.g2.bx.psu.edu/repos/proteore/proteore_filter_keywords_values/MQoutputfilter/2019.03.05 |
Version History
3.0 (earliest) Created 25th Jun 2024 at 11:13 by Helena Rasche
Added/updated 4 files
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masterde313a0
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Views: 339 Downloads: 91
Created: 25th Jun 2024 at 11:13
Last updated: 25th Jun 2024 at 11:13
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