CP_object_tracking_example
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1.0 (latest)

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Workflow Type: Galaxy

example cellprofiler pipeline

Associated Tutorial

This workflows is part of the tutorial CP_object_tracking_example, available in the GTN

Tutorial Author(s): Yi Sun, Beatriz Serrano-Solano, Jean-Karim Hériché

SEEK ID: https://dev.workflowhub.eu/workflows/1254?version=2

ID	Name	Description
0	Starting Modules	toolshed.g2.bx.psu.edu/repos/bgruening/cp_common/cp_common/3.1.9+galaxy1
2	ColorToGray	toolshed.g2.bx.psu.edu/repos/bgruening/cp_color_to_gray/cp_color_to_gray/3.1.9+galaxy0
3	Unzip	toolshed.g2.bx.psu.edu/repos/imgteam/unzip/unzip/0.2
4	IdentifyPrimaryObjects	toolshed.g2.bx.psu.edu/repos/bgruening/cp_identify_primary_objects/cp_identify_primary_objects/3.1.9+galaxy1
5	MeasureObjectSizeShape	toolshed.g2.bx.psu.edu/repos/bgruening/cp_measure_object_size_shape/cp_measure_object_size_shape/3.1.9+galaxy0
6	MeasureObjectIntensity	toolshed.g2.bx.psu.edu/repos/bgruening/cp_measure_object_intensity/cp_measure_object_intensity/3.1.9+galaxy0
7	TrackObjects	toolshed.g2.bx.psu.edu/repos/bgruening/cp_track_objects/cp_track_objects/3.1.9+galaxy0
8	OverlayOutlines	toolshed.g2.bx.psu.edu/repos/bgruening/cp_overlay_outlines/cp_overlay_outlines/3.1.9+galaxy0
9	Tile	toolshed.g2.bx.psu.edu/repos/bgruening/cp_tile/cp_tile/3.1.9+galaxy0
10	SaveImages	toolshed.g2.bx.psu.edu/repos/bgruening/cp_save_images/cp_save_images/3.1.9+galaxy1
11	ExportToSpreadsheet	toolshed.g2.bx.psu.edu/repos/bgruening/cp_export_to_spreadsheet/cp_export_to_spreadsheet/3.1.9+galaxy1
12	CellProfiler	toolshed.g2.bx.psu.edu/repos/bgruening/cp_cellprofiler/cp_cellprofiler/3.1.9+galaxy0

Added/updated 4 files

Open master 66a15ad

Added/updated 4 files

Frozen 4.0 b287782

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Created: 25th Jun 2024 at 11:16

Last updated: 25th Jun 2024 at 11:16