Workflow Type: Galaxy
Open
In this workflow the similarity among set of search queries (e.g. genes) is analyzed based on the associated vocabulary in PubMed. The last tool is an interactive tool that enables the inspection of the data.
Associated Tutorial
This workflows is part of the tutorial Simtext training workflow, available in the GTN
Thanks to...
Tutorial Author(s): Marie Gramm, Dennis Lal group, Daniel Blankenberg
Workflow Author(s):
Steps
ID | Name | Description |
---|---|---|
1 | PubMed query | toolshed.g2.bx.psu.edu/repos/iuc/pubmed_by_queries/pubmed_by_queries/0.0.2 |
2 | PMIDs to PubTator | toolshed.g2.bx.psu.edu/repos/iuc/pmids_to_pubtator_matrix/pmids_to_pubtator_matrix/0.0.2 |
3 | simtext_app | interactive_tool_simtext_app |
Version History
1.0 (earliest) Created 25th Jun 2024 at 11:22 by Helena Rasche
Added/updated 4 files
Open
master
e6b921d
![help](/assets/famfamfam_silk/information-8cfe563be76fb11b27c8ba778f5d40ce6800b244d6ca58ef6e9973308efbe534.png)
Creators
Not specifiedSubmitter
Discussion Channel
Activity
Views: 146 Downloads: 48
Created: 25th Jun 2024 at 11:22
![help](/assets/famfamfam_silk/information-8cfe563be76fb11b27c8ba778f5d40ce6800b244d6ca58ef6e9973308efbe534.png)
None