Heatmap2 Workflow
5.0 (earliest)

4.0 (latest)

5.0 (earliest)

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Workflow Type: Galaxy

Visualization of RNA-Seq results with heatmap2

Associated Tutorial

This workflows is part of the tutorial Heatmap2 Workflow, available in the GTN

Features

Includes Galaxy Workflow Tests

Thanks to...

Tutorial Author(s): Maria Doyle

SEEK ID: https://dev.workflowhub.eu/workflows/1311?version=1

Inputs

ID	Name	Description	Type
heatmap_genes	heatmap_genes	n/a	File
normalized_counts	normalized_counts	n/a	File

Steps

ID	Name	Description
2	Join two Datasets	join1
3	Cut	Cut1
4	Transpose	toolshed.g2.bx.psu.edu/repos/iuc/datamash_transpose/datamash_transpose/1.1.0
5	heatmap2	toolshed.g2.bx.psu.edu/repos/iuc/ggplot2_heatmap2/ggplot2_heatmap2/2.2.1+galaxy1

Outputs

ID	Name	Description	Type
heatmap_pdf	heatmap_pdf	n/a	File

Version History

4.0 (latest) Created 16th Jul 2024 at 14:05 by Helena Rasche

Added/updated 4 files

Open master c302621

5.0 (earliest) Created 25th Jun 2024 at 11:23 by Helena Rasche

Added/updated 4 files

Frozen 5.0 0f21714

Creators and Submitter

Creators

Not specified

Submitter

Helena Rasche

Discussion Channel

GTN Matrix

Tool

ggplot2

License

Creative Commons Attribution 4.0 International

Activity

Views: 458 Downloads: 144

Created: 25th Jun 2024 at 11:22

Last updated: 25th Jun 2024 at 11:23

Heatmap2 Workflow 5.0 (earliest) 4.0 (latest) 5.0 (earliest)