BY-COVID: Data Download Version 1
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Download RO CrateGalaxy workflow
Inputs
| ID | Name | Description | Type |
|---|---|---|---|
| Sample Table | #main/Sample Table | This should be a two column sample table that looks like: ``` Run Group SRR16681566 healthy SRR16681565 healthy SRR16681564 healthy ``` |
|
Steps
| ID | Name | Description |
|---|---|---|
| 1 | Cut | Cut1 |
| 2 | Select | Grep1 |
| 3 | Faster Download and Extract Reads in FASTQ | toolshed.g2.bx.psu.edu/repos/iuc/sra_tools/fasterq_dump/3.0.8+galaxy1 |
Outputs
| ID | Name | Description | Type |
|---|---|---|---|
| output_collection | #main/output_collection | n/a |
|
Version History
0 (earliest) Created 22nd Apr 2024 at 11:09 by Helena Rasche
Added/updated 3 files
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Created: 22nd Apr 2024 at 11:09
Last updated: 22nd Apr 2024 at 11:09
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