de novo Rad Seq
Version 1

Visit source Download RO Crate
Workflow Type: Galaxy

Galaxy workflow

SEEK ID: https://dev.workflowhub.eu/workflows/968?version=1

Inputs

ID Name Description Type
Barcodes_SRR034310.tabular Barcodes_SRR034310.tabular n/a
  • File
Population_map.txt Population_map.txt n/a
  • File
SRR034310.fastq SRR034310.fastq n/a
  • File
ref_genome_chromFa.tar ref_genome_chromFa.tar n/a
  • File

Steps

ID Name Description
4 Stacks: process radtags toolshed.g2.bx.psu.edu/repos/iuc/stacks_procrad/stacks_procrad/1.46.0
5 Stacks: process radtags toolshed.g2.bx.psu.edu/repos/iuc/stacks_procrad/stacks_procrad/1.46.0
6 Stacks: process radtags toolshed.g2.bx.psu.edu/repos/iuc/stacks_procrad/stacks_procrad/1.46.0
7 FastQC toolshed.g2.bx.psu.edu/repos/devteam/fastqc/fastqc/0.69
8 Stacks: de novo map toolshed.g2.bx.psu.edu/repos/iuc/stacks_denovomap/stacks_denovomap/1.46.0
9 Stacks: populations toolshed.g2.bx.psu.edu/repos/iuc/stacks_populations/stacks_populations/1.46.0

Version History

5 (earliest) Created 22nd Apr 2024 at 11:11 by Helena Rasche

Added/updated 3 files


Open master aadb424
help Creators and Submitter
Creators
Not specified
Submitter
Tools
Stacks
FastQC
License
Creative Commons Attribution 4.0 International
Activity

Views: 27

Created: 22nd Apr 2024 at 11:11

Last updated: 22nd Apr 2024 at 11:11

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Total size: 25.9 KB
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