Workflows
What is a Workflow?Filters
Exome SAMtools Workflow
I don't even know. Only works on BSC.
Summary
This tutorial aims to illustrate the process of protein-ligand docking, step by step, using the BioExcel Building Blocks library (biobb). The particular example used is the Mitogen-activated protein kinase 14 (p38-α) protein (PDB code 3HEC), a well-known Protein Kinase enzyme, in complex with the FDA-approved Imatinib, (PDB Ligand code STI, DrugBank Ligand Code DB00619), a small molecule kinase inhibitor used to treat certain types of cancer.
Workflow engine is a jupyter notebook. It ...
workflow-test-fixture
A workflow and associated files for use in SEEK's tests
sort lines and change text to upper case
Exome Alignment Workflow
Rare disease researchers workflow is that they submit their raw data (fastq), run the mapping and variant calling RD-Connect pipeline and obtain unannotated gvcf files to further submit to the RD-Connect GPAP or analyse on their own.
This demonstrator focuses on the variant calling pipeline. The raw genomic data is processed using the RD-Connect pipeline (Laurie et al., 2016) running on the standards (GA4GH) compliant, interoperable container ...
Type: Nextflow
Creators: José Mª Fernández, Víctor Fernández
Submitters: Laura Rodriguez-Navas, José Mª Fernández