Workflows
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nf-core20
covid-197
cat3
annotation2
assembly2
dna2
genome-assembly2
metagenomics2
Proteomics2
rna2
16s1
adna1
amplicon-sequencing1
ancientdna1
atac-seq1
ATACseq1
b-cell1
bacterial-genomes1
binning1
Bioinformatics1
bisulfite-sequencing1
cage1
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chip1
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chromatin-accessibiity1
chromatin-immunoprecipitation1
clinical1
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crispr-cas91
data-independent-proteomics1
deep-variant1
denovo1
denovo-assembly1
dia-proteomics1
dna-methylation1
gene-expression1
google1
guide-seq1
hla1
hla-typing1
hybrid-assembly1
immcantation1
immune1
immunology1
k-mer1
kmer1
kmer-counting1
kmer-frequency-count1
macs21
mass-spectrometry1
methyl-seq1
nanopore1
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ngs-pipeline1
optitype1
pathogen-genomics1
peak-calling1
peptides1
personalized-medicine1
population-genetics1
qiime1
RetroPath1
rrna1
shotgun-ms1
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variant-annotation1
variant-calling1
visualisation1
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Submitter
Finn Bacall53
Space
General12
Creator
Finn Bacall7
Collection
nf-core18
Topic annotations
Computer science1
53
Workflows visible to you, out of a total of 79
Galaxy!
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Workflow for quality assessment of paired reads and classification using NGTax 2.0 and functional annotation using picrust2. In addition files are exported to their respective subfolders for easier data management in a later stage. Steps:
- FastQC (read quality control)
- NGTax 2.0
- Picrust 2
- Export module for ngtax
workflow-test-fixture
A workflow and associated files for use in SEEK's tests