Ref Based Rad Seq
5.0 (earliest)

3.0 (latest)

5.0 (earliest)

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Workflow Type: Galaxy

RAD-Seq Reference-based data analysis

Associated Tutorial

This workflows is part of the tutorial Ref Based Rad Seq, available in the GTN

Tutorial Author(s): Yvan Le Bras

SEEK ID: https://dev.workflowhub.eu/workflows/1245?version=1

ID	Name	Description	Type
Barcodes_SRR034310.tabular	Barcodes_SRR034310.tabular	n/a	File
Population_map.txt	Population_map.txt	n/a	File
SRR034310.fastq	SRR034310.fastq	n/a	File
ref_genome_chromFa.tar	ref_genome_chromFa.tar	n/a	File

ID	Name	Description
4	Stacks: process radtags	toolshed.g2.bx.psu.edu/repos/iuc/stacks_procrad/stacks_procrad/1.46.0
5	Stacks: process radtags	toolshed.g2.bx.psu.edu/repos/iuc/stacks_procrad/stacks_procrad/1.46.0
6	Stacks: process radtags	toolshed.g2.bx.psu.edu/repos/iuc/stacks_procrad/stacks_procrad/1.46.0
7	Map with BWA for Illumina	toolshed.g2.bx.psu.edu/repos/devteam/bwa_wrappers/bwa_wrapper/1.2.3
8	Stacks: reference map	toolshed.g2.bx.psu.edu/repos/iuc/stacks_refmap/stacks_refmap/1.46.0
9	Stacks: populations	toolshed.g2.bx.psu.edu/repos/iuc/stacks_populations/stacks_populations/1.46.0

Added/updated 4 files

Open master 33a659d

Added/updated 4 files

Frozen 5.0 9ec7b88

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Created: 25th Jun 2024 at 11:15

Last updated: 25th Jun 2024 at 11:15