Tree Building (imported from uploaded file)
3.0 (earliest)

1.0 (latest)

3.0 (earliest)

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Run on Galaxy

Workflow Type: Galaxy

Tree building for "Phylogenetics - Back to basics"

Associated Tutorial

This workflows is part of the tutorial Tree Building (imported from uploaded file), available in the GTN

Features

Includes Galaxy Workflow Tests

Thanks to...

Tutorial Author(s): Michael Charleston

Tutorial Contributor(s): Adam Taranto, Melissa Burke, Patrick Capon

Workflow Author(s): Helena Rasche, Michael Charleston

SEEK ID: https://dev.workflowhub.eu/workflows/1296?version=1

Inputs

ID	Name	Description	Type
Input FASTA Sequence File	#main/Input FASTA Sequence File	This should be a fasta formatted file with multiple sequences.	File

Steps

ID	Name	Description
1	MAFFT	toolshed.g2.bx.psu.edu/repos/rnateam/mafft/rbc_mafft/7.508+galaxy1
2	FASTTREE	toolshed.g2.bx.psu.edu/repos/iuc/fasttree/fasttree/2.1.10+galaxy1
3	IQ-TREE	toolshed.g2.bx.psu.edu/repos/iuc/iqtree/iqtree/2.1.2+galaxy2

Outputs

ID	Name	Description	Type
output	#main/output	n/a	File
outputAlignment	#main/outputAlignment	n/a	File
treefile	#main/treefile	n/a	File

Version History

1.0 (latest) Created 16th Jul 2024 at 14:24 by Helena Rasche

Added/updated 4 files

Open master 5c2a38f

3.0 (earliest) Created 25th Jun 2024 at 11:21 by Helena Rasche

Added/updated 4 files

Frozen 3.0 450c9d3

Creators and Submitter

Creators

Not specified

Submitter

Helena Rasche

Discussion Channel

GTN Matrix

Tools

MAFFT

FastTree

iqtree

License

MIT License (MIT)

Activity

Views: 1433 Downloads: 528 Runs: 0

Created: 25th Jun 2024 at 11:21

Last updated: 25th Jun 2024 at 11:21

Tree Building (imported from uploaded file) 3.0 (earliest) 1.0 (latest) 3.0 (earliest)