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COnSensus Interaction Network InFErence Service
Inference framework for reconstructing networks using a consensus approach between multiple methods and data sources.
Reference
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Inputs
ID | Name | Description | Type |
---|---|---|---|
data_matrix | n/a | Gene expression data matrix |
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gmt_filepath | n/a | Optional GMT file to perform inference on multiple gene sets |
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index_col | n/a | Column index in the data. Defaults to None, a.k.a., no index |
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outdir | n/a | Path to the output directory |
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separator | n/a | Separator for the data. Defaults to . |
|
samples_on_rows | n/a | Flag that indicates that data contain the samples on rows. Defaults to False. |
|
Steps
ID | Name | Description |
---|---|---|
cosifer | n/a | n/a |
Outputs
ID | Name | Description | Type |
---|---|---|---|
resdir | n/a | n/a |
|
Version History
Version 3 (latest) Created 16th Apr 2021 at 09:58 by Laura Rodriguez-Navas
update input descriptions
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Version 2 Created 22nd Mar 2021 at 12:40 by Laura Rodriguez-Navas
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Version 1 (earliest) Created 2nd Feb 2021 at 12:48 by Laura Rodriguez-Navas
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Views: 3231 Downloads: 667
Created: 2nd Feb 2021 at 12:48
Last updated: 16th Apr 2021 at 10:36
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