Workflows

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370 Workflows visible to you, out of a total of 464

TIFF COMPSs Matrix Multiplication, out-of-core using files

Testing

Hypermatrix size 2x2 blocks, block size 2x2 elements

Type: COMPSs

Creator: Raül Sirvent

Submitter: Raül Sirvent

Created: 5th Oct 2022 at 15:55

JPG COMPSs Matrix Multiplication, out-of-core using files

Testing

Hypermatrix size 2x2 blocks, block size 2x2 elements

Type: COMPSs

Creator: Raül Sirvent

Submitter: Raül Sirvent

Created: 5th Oct 2022 at 15:49, Last updated: 5th Oct 2022 at 15:53

EPS COMPSs Matrix Multiplication, out-of-core using files

Testing

Hypermatrix size 2x2 blocks, block size 2x2 elements

Type: COMPSs

Creator: Raül Sirvent

Submitter: Raül Sirvent

Created: 5th Oct 2022 at 15:46, Last updated: 5th Oct 2022 at 15:52

SVG COMPSs Matrix Multiplication, out-of-core using files

Testing

Hypermatrix size 2x2 blocks, block size 2x2 elements

Type: COMPSs

Creator: Raül Sirvent

Submitter: Raül Sirvent

Created: 5th Oct 2022 at 15:42, Last updated: 5th Oct 2022 at 15:52

PNG COMPSs Matrix Multiplication, out-of-core using files

Testing

Hypermatrix size 2x2 blocks, block size 2x2 elements

Type: COMPSs

Creator: Raül Sirvent

Submitter: Raül Sirvent

Created: 5th Oct 2022 at 15:20, Last updated: 5th Oct 2022 at 15:51

Snakemake workflow for the analysis of Whole-Exome Sequencing data, from FASTQ to ricalibrated VCF

IGG-Bioinfo

DiVA.wes

This is a fork of DiVA (DNA Variant Analysis), a Snakemake-based pipeline for Next-Generation Sequencing Exome data analysis, developed at [CRS4 Next Generation ...

Type: Snakemake

Creators: None

Submitter: Paolo Uva

Created: 30th Sep 2022 at 10:23

fragment-based-docking-scoring/main

Testing

Tests Passing

Fragment-based virtual screening with docking and pose scoring

Dock a compound library against a target protein with rDock and validate the poses generated against a reference fragment using SuCOS to compare the feature overlap. Poses are filtered by a user-specified SuCOS threshold.

A list of fragments should be specified which will be used to define the cavity for docking, using the 'Frankenstein ligand' technique. For more details, please see https://www.informaticsmatters.com/blog/2018/11/23/cavities-and-frankenstein-molecules.html ...

Type: Galaxy

Creator: Simon Bray, Tim Dudgeon

Submitter: Simone Leo

Created: 21st Sep 2022 at 08:44

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DiVA.wes

Fragment-based virtual screening with docking and pose scoring

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