Workflows
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Workflow type
Nextflow86
Tag
nf-core20
annotation2
assembly2
dna2
genome-assembly2
metagenomics2
Proteomics2
rna2
16s1
adna1
amplicon-sequencing1
ancientdna1
atac-seq1
b-cell1
bacterial-genomes1
binning1
Bioinformatics1
bisulfite-sequencing1
cage1
cage-seq1
cageseq-data1
chip1
chip-seq1
chromatin-accessibiity1
chromatin-immunoprecipitation1
clinical1
crispr1
crispr-cas91
data-independent-proteomics1
deep-variant1
denovo1
denovo-assembly1
dia-proteomics1
dna-methylation1
gene-expression1
google1
guide-seq1
hla1
hla-typing1
hybrid-assembly1
immcantation1
immune1
immunology1
k-mer1
kmer1
kmer-counting1
kmer-frequency-count1
macs21
mass-spectrometry1
methyl-seq1
nanopore1
nanopore-sequencing1
ngs-pipeline1
optitype1
pathogen-genomics1
peak-calling1
peptides1
personalized-medicine1
population-genetics1
qiime1
rrna1
shotgun-ms1
variant-annotation1
variant-calling1
More...
Team
nf-core86
Collection
nf-core18
86
Workflows visible to you, out of a total of 86
Pipeline for the identification of circular DNAs
ChIP-seq peak-calling and differential analysis pipeline.
Type: Nextflow
Creators: Espinosa-Carrasco J, Patel H, Wang C, Ewels P
Submitter: WorkflowHub Sandbox Bot
Workflow converts one or multiple bam/cram files to fastq format
CAGE-seq pipeline
Type: Nextflow
Creators: Kevin Menden, Tristan Kast, Matthias Hörtenhuber
Submitter: WorkflowHub Sandbox Bot
Simple bacterial assembly and annotation
A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences
Amplicon sequencing analysis workflow using DADA2 and QIIME2
