Workflows

What is a Workflow?
51 Workflows visible to you, out of a total of 115

Hypermatrix size 2x2 blocks, block size 2x2 elements

Hypermatrix size 2x2 blocks, block size 2x2 elements

Type: COMPSs

Creators: Raül Sirvent, Adam Hospital, Rosa M. Badia

Submitter: Raül Sirvent

Hypermatrix size 2x2 blocks, block size 2x2 elements

Type: COMPSs

Creators: Raül Sirvent, Adam Hospital, Rosa M. Badia

Submitter: Raül Sirvent

Multi-band array detection and location of seismic sources. BackTrackBB is a program for detection and space-time location of seismic sources based on multi-scale, frequency-selective statistical coherence of the wave field recorded by dense large-scale seismic networks and local antennas. The method is designed to enhance coherence of the signal statistical features across the array of sensors and consists of three steps. They are signal processing, space-time imaging and detection and location. ...

Type: COMPSs

Creators: Natalia Poiata, Javier Conejero, Claudio Satriano

Submitter: Raül Sirvent

Stable

A simple example of a CWL workflow with a single Hello world tool from Dockstore.

Type: Common Workflow Language

Creator: James Eddy, Dockstore

Submitter: Stian Soiland-Reyes

SARS-CoV-2 Sequence Quality Assurance Workflow Kontraption, version 4.0.2

Type: Galaxy

Creators: None

Submitter: Stian Soiland-Reyes

This workflow take as input a collection of paired fastq. It will remove bad quality and adapters with cutadapt. Map with Bowtie2 end-to-end. Will remove reads on MT and unconcordant pairs and pairs with mapping quality below 30 and PCR duplicates. Will compute the pile-up on 5' +- 100bp. Will call peaks and count the number of reads falling in the 1kb region centered on the summit. Will plot the number of reads for each fragment length.

Type: Galaxy

Creator: Lucille Delisle

Submitter: Finn Bacall

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