Workflows

What is a Workflow?
155 Workflows visible to you, out of a total of 242
Stable

nf-core/vipr is a bioinformatics best-practice analysis pipeline for assembly and intrahost / low-frequency variant calling for viral samples. The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It comes with docker / singularity containers making installation trivial and results highly reproducible. Pipeline Steps

Step Main program/s

Trimming, combining of read-pairs per sample and QC Skewer, FastQC

Decontamination ...

Type: Nextflow

Creator: Andreas Wilm, October SESSIONS, Paola Florez DE SESSIONS, ZHU Yuan, Shuzhen SIM, CHU Wenhan Collins

Submitter: Laura Rodriguez-Navas

No description specified

Type: Unrecognized workflow type

Creators: None

Submitter: Stian Soiland-Reyes

Work-in-progress

BioExcel building blocks workflow used in the COVID-19 research

Type: Unrecognized workflow type

Creators: None

Submitter: Stian Soiland-Reyes

No description specified

Type: Unrecognized workflow type

Creator: Stian Soiland-Reyes

Submitter: Stian Soiland-Reyes

No description specified

Type: Unrecognized workflow type

Creator: Stian Soiland-Reyes

Submitter: Stian Soiland-Reyes

No description specified

Type: Unrecognized workflow type

Creator: Stian Soiland-Reyes

Submitter: Stian Soiland-Reyes

The workflow is part of COVID-19 analysis on usegalaxy.★

Virtual screening of the SARS-CoV-2 main protease (de.NBI-cloud, STFC)

Type: Galaxy

Creators: Kiran K Telukunta, timdudgeon

Submitter: Kiran K Telukunta

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