WorkflowsWhat is a Workflow?
nf-core/vipr is a bioinformatics best-practice analysis pipeline for assembly and intrahost / low-frequency variant calling for viral samples. The pipeline is built using Nextflow, a workflow tool to run tasks across multiple compute infrastructures in a very portable manner. It comes with docker / singularity containers making installation trivial and results highly reproducible. Pipeline Steps
Step Main program/s
Trimming, combining of read-pairs per sample and QC Skewer, FastQC
Creator: Andreas Wilm, October SESSIONS, Paola Florez DE SESSIONS, ZHU Yuan, Shuzhen SIM, CHU Wenhan Collins
Submitter: Laura Rodriguez-Navas