Workflows
What is a Workflow?Filters
Metatranscriptomics analysis using microbiome RNA-seq data (short)
Associated Tutorial
This workflows is part of the tutorial Workflow 1: Preprocessing, available in the GTN
Features
- Includes Galaxy Workflow Tests
Thanks to...
**Tutorial ...
Nanopore datasets analysis - Phylogenetic Identification - antibiotic resistance genes detection and contigs building
Associated Tutorial
This workflows is part of the tutorial Gene-based Pathogen Identification, available in the GTN
Features
- Includes [Galaxy Workflow ...
Data Manipulation Olympics
Associated Tutorial
This workflows is part of the tutorial GTN Tutorial: Data manipulation Olympics - all steps and exercises, available in the GTN
Thanks to...
Tutorial Author(s): Saskia Hiltemann
**Tutorial ...
Run this on the trimmed consensus reads (DCS or SSCS) from Du Novo.
Associated Tutorial
This workflows is part of the tutorial Du Novo GTN Tutorial - Variant Calling, available in the GTN
Thanks to...
Tutorial Author(s): Anton Nekrutenko, [Nick ...
Metatranscriptomics analysis using microbiome RNA-seq data (short)
Associated Tutorial
This workflows is part of the tutorial Workflow 2: Community Profile, available in the GTN
Features
- Includes Galaxy Workflow Tests
Thanks to...
**Tutorial ...
Microbiome - QC and Contamination Filtering
Associated Tutorial
This workflows is part of the tutorial Nanopore Preprocessing, available in the GTN
Features
- Includes Galaxy Workflow Tests
- Includes a [Galaxy Workflow ...
Run this on raw duplex sequencing reads to produce duplex consensus sequences.
Associated Tutorial
This workflows is part of the tutorial Du Novo GTN Tutorial - Make Consensus Sequences, available in the GTN
Thanks to...
Tutorial Author(s): Anton Nekrutenko, [Nick ...
