Workflows
What is a Workflow?Filters
A fully reproducible and modern ancient DNA pipeline in Nextflow and with cloud support.
Type: Nextflow
Creators: The nf-core/eager community, Alexander Peltzer, Stephen Clayton, James A Fellows-Yates
Submitter: WorkflowHub Sandbox Bot
Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes sequencing QC, spike-in normalisation, IgG control normalisation, peak calling and downstream peak analysis.
Type: Nextflow
Creators: Chris Cheshire, Chris Cheshire and Charlotte West, Charlotte West and Tamara Hodgetts
Submitter: WorkflowHub Sandbox Bot
Introduction
CoproID helps you to identify the "true maker" of a sequenced Coprolite by comparing the reads mapping ...
ChIP-seq peak-calling and differential analysis pipeline.
Type: Nextflow
Creators: Espinosa-Carrasco J, Philip Ewels, Patel H, Wang C, Ewels P
Submitter: WorkflowHub Sandbox Bot
An automated processing pipeline for mammalian bulk calling cards experiments
ATACSeq peak-calling and differential analysis pipeline.
Type: Nextflow
Creators: Patel H, Harshil Patel, Langer B, Espinosa-Carrasco J, Syme R
Submitter: WorkflowHub Sandbox Bot
Integration of viral sequences in genomic data
